Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.95□□□□□ -1.62
PCDH1Q08174 MIR4489-201ENST00000578869 62 ntBASIC4.95□□□□□ -1.62
PCDH1Q08174 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.95□□□□□ -1.62
PCDH1Q08174 MIR5188-201ENST00000583467 113 ntBASIC4.95□□□□□ -1.62
PCDH1Q08174 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.95□□□□□ -1.62
PCDH1Q08174 AL160281.1-201ENST00000605307 311 ntBASIC4.95□□□□□ -1.62
PCDH1Q08174 AC004805.2-201ENST00000605382 482 ntBASIC4.95□□□□□ -1.62
PCDH1Q08174 HMGB1P50-201ENST00000605814 607 ntBASIC4.95□□□□□ -1.62
PCDH1Q08174 AC005344.1-201ENST00000613391 459 ntBASIC4.95□□□□□ -1.62
PCDH1Q08174 AL512624.1-201ENST00000613638 469 ntBASIC4.95□□□□□ -1.62
PCDH1Q08174 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.95□□□□□ -1.62
PCDH1Q08174 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PCDH1Q08174 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
PCDH1Q08174 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PCDH1Q08174 AL731566.1-201ENST00000620490 1937 ntBASIC4.95□□□□□ -1.62
PCDH1Q08174 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
PCDH1Q08174 PRO1804-201ENST00000623780 2050 ntBASIC4.95□□□□□ -1.62
PCDH1Q08174 AL450345.1-202ENST00000605741 3881 ntBASIC4.95□□□□□ -1.62
PCDH1Q08174 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.95□□□□□ -1.62
PCDH1Q08174 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
PCDH1Q08174 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
PCDH1Q08174 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
PCDH1Q08174 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.94□□□□□ -1.62
PCDH1Q08174 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
PCDH1Q08174 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PCDH1Q08174 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.94□□□□□ -1.62
PCDH1Q08174 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.94□□□□□ -1.62
PCDH1Q08174 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.94□□□□□ -1.62
PCDH1Q08174 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
PCDH1Q08174 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
PCDH1Q08174 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PCDH1Q08174 RN7SKP113-201ENST00000363891 295 ntBASIC4.94□□□□□ -1.62
PCDH1Q08174 RNU4-42P-201ENST00000364738 142 ntBASIC4.94□□□□□ -1.62
PCDH1Q08174 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
PCDH1Q08174 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
PCDH1Q08174 AL445529.1-201ENST00000398713 389 ntBASIC4.94□□□□□ -1.62
PCDH1Q08174 GLULP6-201ENST00000399502 913 ntBASIC4.94□□□□□ -1.62
PCDH1Q08174 RNU6-1156P-201ENST00000410365 100 ntBASIC4.94□□□□□ -1.62
PCDH1Q08174 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.94□□□□□ -1.62
PCDH1Q08174 AC104333.2-201ENST00000422630 192 ntBASIC4.94□□□□□ -1.62
PCDH1Q08174 AL353997.1-201ENST00000432936 108 ntBASIC4.94□□□□□ -1.62
PCDH1Q08174 RPL35AP21-201ENST00000437667 333 ntBASIC4.94□□□□□ -1.62
PCDH1Q08174 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.94□□□□□ -1.62
PCDH1Q08174 AL590399.6-201ENST00000446396 307 ntBASIC4.94□□□□□ -1.62
PCDH1Q08174 AL360271.2-201ENST00000447710 161 ntBASIC4.94□□□□□ -1.62
PCDH1Q08174 BTF3P6-201ENST00000448054 499 ntBASIC4.94□□□□□ -1.62
PCDH1Q08174 AC093852.1-201ENST00000503587 266 ntBASIC4.94□□□□□ -1.62
PCDH1Q08174 MTND3P25-201ENST00000509243 135 ntBASIC4.94□□□□□ -1.62
PCDH1Q08174 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.94□□□□□ -1.62
PCDH1Q08174 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.94□□□□□ -1.62
PCDH1Q08174 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.94□□□□□ -1.62
PCDH1Q08174 NDUFB4P11-201ENST00000560510 395 ntBASIC4.94□□□□□ -1.62
PCDH1Q08174 AC026470.2-201ENST00000561492 181 ntBASIC4.94□□□□□ -1.62
PCDH1Q08174 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC4.94□□□□□ -1.62
PCDH1Q08174 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.94□□□□□ -1.62
PCDH1Q08174 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.94□□□□□ -1.62
PCDH1Q08174 AC011447.4-201ENST00000587562 111 ntBASIC4.94□□□□□ -1.62
PCDH1Q08174 AL512329.2-201ENST00000607350 548 ntBASIC4.94□□□□□ -1.62
PCDH1Q08174 AL365434.2-201ENST00000607979 234 ntBASIC4.94□□□□□ -1.62
PCDH1Q08174 AL591516.1-201ENST00000611326 274 ntBASIC4.94□□□□□ -1.62
PCDH1Q08174 SDR42E1P1-201ENST00000611327 477 ntBASIC4.94□□□□□ -1.62
PCDH1Q08174 U73479.1-201ENST00000618062 168 ntBASIC4.94□□□□□ -1.62
PCDH1Q08174 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PCDH1Q08174 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PCDH1Q08174 AL731532.2-201ENST00000623542 1953 ntBASIC4.94□□□□□ -1.62
PCDH1Q08174 AC233263.6-201ENST00000631132 1963 ntBASIC4.94□□□□□ -1.62
PCDH1Q08174 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PCDH1Q08174 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
PCDH1Q08174 ZNF72P-201ENST00000425869 1908 ntBASIC4.93□□□□□ -1.62
PCDH1Q08174 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PCDH1Q08174 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
PCDH1Q08174 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.93□□□□□ -1.62
PCDH1Q08174 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.93□□□□□ -1.62
PCDH1Q08174 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
PCDH1Q08174 Y_RNA.276-201ENST00000364732 109 ntBASIC4.93□□□□□ -1.62
PCDH1Q08174 Y_RNA.350-201ENST00000365409 98 ntBASIC4.93□□□□□ -1.62
PCDH1Q08174 SNORA2.3-201ENST00000383920 135 ntBASIC4.93□□□□□ -1.62
PCDH1Q08174 RNU6-790P-201ENST00000384479 105 ntBASIC4.93□□□□□ -1.62
PCDH1Q08174 MIR578-201ENST00000384828 96 ntBASIC4.93□□□□□ -1.62
PCDH1Q08174 MIR105-2-201ENST00000385083 81 ntBASIC4.93□□□□□ -1.62
PCDH1Q08174 AL035079.1-201ENST00000405210 287 ntBASIC4.93□□□□□ -1.62
PCDH1Q08174 AL138885.1-201ENST00000405921 675 ntBASIC4.93□□□□□ -1.62
PCDH1Q08174 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.93□□□□□ -1.62
PCDH1Q08174 AL030996.1-201ENST00000411430 235 ntBASIC4.93□□□□□ -1.62
PCDH1Q08174 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.93□□□□□ -1.62
PCDH1Q08174 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.93□□□□□ -1.62
PCDH1Q08174 AL589765.3-201ENST00000446084 462 ntBASIC4.93□□□□□ -1.62
PCDH1Q08174 RNU6-1132P-201ENST00000459214 107 ntBASIC4.93□□□□□ -1.62
PCDH1Q08174 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.93□□□□□ -1.62
PCDH1Q08174 RN7SL30P-201ENST00000488416 306 ntBASIC4.93□□□□□ -1.62
PCDH1Q08174 AC083829.1-201ENST00000503756 657 ntBASIC4.93□□□□□ -1.62
PCDH1Q08174 SNORD116-26-201ENST00000516006 96 ntBASIC4.93□□□□□ -1.62
PCDH1Q08174 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC4.93□□□□□ -1.62
PCDH1Q08174 AC008489.1-201ENST00000524271 483 ntBASIC4.93□□□□□ -1.62
PCDH1Q08174 SNRPGP16-201ENST00000533275 226 ntBASIC4.93□□□□□ -1.62
PCDH1Q08174 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.93□□□□□ -1.62
PCDH1Q08174 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.93□□□□□ -1.62
PCDH1Q08174 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC4.93□□□□□ -1.62
PCDH1Q08174 OR1M4P-201ENST00000589199 287 ntBASIC4.93□□□□□ -1.62
PCDH1Q08174 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms