Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC1.21□□□□□ -2.22
TFF3Q07654 AP000560.1-201ENST00000624150 1937 ntBASIC1.21□□□□□ -2.22
TFF3Q07654 SNORD114-22-201ENST00000365423 72 ntBASIC1.21□□□□□ -2.22
TFF3Q07654 Y_RNA.466-201ENST00000384294 113 ntBASIC1.21□□□□□ -2.22
TFF3Q07654 RPL21P1-201ENST00000399532 476 ntBASIC1.21□□□□□ -2.22
TFF3Q07654 AL023807.1-201ENST00000407932 359 ntBASIC1.21□□□□□ -2.22
TFF3Q07654 PTGES3P2-201ENST00000407942 482 ntBASIC1.21□□□□□ -2.22
TFF3Q07654 AL445183.3-201ENST00000414168 502 ntBASIC1.21□□□□□ -2.22
TFF3Q07654 AC074117.2-201ENST00000417130 397 ntBASIC1.21□□□□□ -2.22
TFF3Q07654 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC1.21□□□□□ -2.22
TFF3Q07654 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
TFF3Q07654 COX6CP12-201ENST00000446748 202 ntBASIC1.21□□□□□ -2.22
TFF3Q07654 RPL5P13-201ENST00000462840 709 ntBASIC1.21□□□□□ -2.22
TFF3Q07654 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.21□□□□□ -2.22
TFF3Q07654 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
TFF3Q07654 RPL21P103-201ENST00000479921 488 ntBASIC1.21□□□□□ -2.22
TFF3Q07654 MTND3P24-201ENST00000506306 329 ntBASIC1.21□□□□□ -2.22
TFF3Q07654 AC084364.2-201ENST00000546924 395 ntBASIC1.21□□□□□ -2.22
TFF3Q07654 AC023813.2-201ENST00000564321 469 ntBASIC1.21□□□□□ -2.22
TFF3Q07654 MIR3660-201ENST00000584845 100 ntBASIC1.21□□□□□ -2.22
TFF3Q07654 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.21□□□□□ -2.22
TFF3Q07654 AC136443.5-201ENST00000603741 370 ntBASIC1.21□□□□□ -2.22
TFF3Q07654 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.21□□□□□ -2.22
TFF3Q07654 AC091895.1-201ENST00000624494 256 ntBASIC1.21□□□□□ -2.22
TFF3Q07654 AP000648.3-201ENST00000623539 4507 ntBASIC1.21□□□□□ -2.22
TFF3Q07654 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
TFF3Q07654 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
TFF3Q07654 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
TFF3Q07654 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC1.2□□□□□ -2.22
TFF3Q07654 MIR627-201ENST00000384979 97 ntBASIC1.2□□□□□ -2.22
TFF3Q07654 HMGB1P45-201ENST00000435986 653 ntBASIC1.2□□□□□ -2.22
TFF3Q07654 SNRPGP13-201ENST00000442212 177 ntBASIC1.2□□□□□ -2.22
TFF3Q07654 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC1.2□□□□□ -2.22
TFF3Q07654 MTCYBP18-201ENST00000501056 747 ntBASIC1.2□□□□□ -2.22
TFF3Q07654 Y_RNA.675-201ENST00000516389 149 ntBASIC1.2□□□□□ -2.22
TFF3Q07654 RNA5SP61-201ENST00000516453 100 ntBASIC1.2□□□□□ -2.22
TFF3Q07654 RN7SKP234-201ENST00000517173 224 ntBASIC1.2□□□□□ -2.22
TFF3Q07654 AC022880.1-201ENST00000534017 973 ntBASIC1.2□□□□□ -2.22
TFF3Q07654 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.2□□□□□ -2.22
TFF3Q07654 AL096840.1-201ENST00000603287 93 ntBASIC1.2□□□□□ -2.22
TFF3Q07654 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC1.2□□□□□ -2.22
TFF3Q07654 MIR6078-201ENST00000611069 100 ntBASIC1.2□□□□□ -2.22
TFF3Q07654 AC007275.1-201ENST00000621243 671 ntBASIC1.2□□□□□ -2.22
TFF3Q07654 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
TFF3Q07654 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
TFF3Q07654 MIR96-201ENST00000362288 78 ntBASIC1.19□□□□□ -2.22
TFF3Q07654 U8.3-201ENST00000363321 132 ntBASIC1.19□□□□□ -2.22
TFF3Q07654 RNU1-22P-201ENST00000363334 158 ntBASIC1.19□□□□□ -2.22
TFF3Q07654 OR1L1-202ENST00000373686 1083 ntBASIC1.19□□□□□ -2.22
TFF3Q07654 AL590084.1-201ENST00000407885 387 ntBASIC1.19□□□□□ -2.22
TFF3Q07654 AC073464.3-201ENST00000422564 712 ntBASIC1.19□□□□□ -2.22
TFF3Q07654 AL358075.3-201ENST00000426289 226 ntBASIC1.19□□□□□ -2.22
TFF3Q07654 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.19□□□□□ -2.22
TFF3Q07654 ELOCP6-201ENST00000429066 328 ntBASIC1.19□□□□□ -2.22
TFF3Q07654 FABP5P3-201ENST00000437960 408 ntBASIC1.19□□□□□ -2.22
TFF3Q07654 SDCBPP1-201ENST00000440192 890 ntBASIC1.19□□□□□ -2.22
TFF3Q07654 RPL23AP16-201ENST00000441715 421 ntBASIC1.19□□□□□ -2.22
TFF3Q07654 AP002345.1-201ENST00000456493 928 ntBASIC1.19□□□□□ -2.22
TFF3Q07654 ELOCP12-201ENST00000458706 328 ntBASIC1.19□□□□□ -2.22
TFF3Q07654 RNA5SP233-201ENST00000459153 113 ntBASIC1.19□□□□□ -2.22
TFF3Q07654 AC004223.1-201ENST00000479840 271 ntBASIC1.19□□□□□ -2.22
TFF3Q07654 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC1.19□□□□□ -2.22
TFF3Q07654 AC008526.1-201ENST00000509149 338 ntBASIC1.19□□□□□ -2.22
TFF3Q07654 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC1.19□□□□□ -2.22
TFF3Q07654 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.19□□□□□ -2.22
TFF3Q07654 AC008083.4-201ENST00000615076 444 ntBASIC1.19□□□□□ -2.22
TFF3Q07654 RMST_2.1-201ENST00000617263 136 ntBASIC1.19□□□□□ -2.22
TFF3Q07654 AC006065.5-201ENST00000623427 349 ntBASIC1.19□□□□□ -2.22
TFF3Q07654 AC012640.5-201ENST00000623897 319 ntBASIC1.19□□□□□ -2.22
TFF3Q07654 AC106730.3-201ENST00000624568 641 ntBASIC1.19□□□□□ -2.22
TFF3Q07654 OR4G11P-202ENST00000642116 1414 ntBASIC1.19□□□□□ -2.22
TFF3Q07654 AC099654.7-201ENST00000635788 2127 ntBASIC1.19□□□□□ -2.22
TFF3Q07654 RNU1-62P-201ENST00000362599 164 ntBASIC1.18□□□□□ -2.22
TFF3Q07654 SNORA51.2-201ENST00000364595 132 ntBASIC1.18□□□□□ -2.22
TFF3Q07654 Y_RNA.540-201ENST00000384638 111 ntBASIC1.18□□□□□ -2.22
TFF3Q07654 AC092745.2-202ENST00000411880 369 ntBASIC1.18□□□□□ -2.22
TFF3Q07654 SNORD56-201ENST00000413522 71 ntBASIC1.18□□□□□ -2.22
TFF3Q07654 AL136133.1-201ENST00000413694 376 ntBASIC1.18□□□□□ -2.22
TFF3Q07654 RPS3AP44-201ENST00000425466 790 ntBASIC1.18□□□□□ -2.22
TFF3Q07654 RPL35AP22-201ENST00000436855 335 ntBASIC1.18□□□□□ -2.22
TFF3Q07654 AC009238.1-201ENST00000442165 424 ntBASIC1.18□□□□□ -2.22
TFF3Q07654 AC009237.6-201ENST00000446969 424 ntBASIC1.18□□□□□ -2.22
TFF3Q07654 HMGB1P26-201ENST00000452520 628 ntBASIC1.18□□□□□ -2.22
TFF3Q07654 AP004607.1-201ENST00000524456 203 ntBASIC1.18□□□□□ -2.22
TFF3Q07654 CDC27P3-201ENST00000635418 1910 ntBASIC1.18□□□□□ -2.22
TFF3Q07654 OR4G1P-203ENST00000641984 1631 ntBASIC1.18□□□□□ -2.22
TFF3Q07654 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
TFF3Q07654 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
TFF3Q07654 RNU6-799P-201ENST00000363567 107 ntBASIC1.17□□□□□ -2.22
TFF3Q07654 SNORA7.2-201ENST00000364446 145 ntBASIC1.17□□□□□ -2.22
TFF3Q07654 DEFB109C-201ENST00000382575 264 ntBASIC1.17□□□□□ -2.22
TFF3Q07654 DEFB109B-201ENST00000382656 264 ntBASIC1.17□□□□□ -2.22
TFF3Q07654 SNORA40.6-201ENST00000391153 128 ntBASIC1.17□□□□□ -2.22
TFF3Q07654 RN7SKP51-201ENST00000410781 304 ntBASIC1.17□□□□□ -2.22
TFF3Q07654 AC233728.2-201ENST00000425348 757 ntBASIC1.17□□□□□ -2.22
TFF3Q07654 VN1R108P-201ENST00000431580 830 ntBASIC1.17□□□□□ -2.22
TFF3Q07654 GTF2IP7-202ENST00000436677 309 ntBASIC1.17□□□□□ -2.22
TFF3Q07654 PIGFP3-201ENST00000441918 722 ntBASIC1.17□□□□□ -2.22
TFF3Q07654 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC1.17□□□□□ -2.22
TFF3Q07654 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms