Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CX3CL1P78423 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CX3CL1P78423 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.06□□□□□ -1.92
CX3CL1P78423 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.06□□□□□ -1.92
CX3CL1P78423 AC008568.2-201ENST00000623862 2313 ntBASIC3.05□□□□□ -1.92
CX3CL1P78423 CEP170P1-201ENST00000502249 4587 ntBASIC3.05□□□□□ -1.92
CX3CL1P78423 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
CX3CL1P78423 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CX3CL1P78423 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
CX3CL1P78423 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.05□□□□□ -1.92
CX3CL1P78423 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CX3CL1P78423 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
CX3CL1P78423 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.05□□□□□ -1.92
CX3CL1P78423 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CX3CL1P78423 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
CX3CL1P78423 AC092447.7-201ENST00000422212 1621 ntBASIC3.05□□□□□ -1.92
CX3CL1P78423 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.05□□□□□ -1.92
CX3CL1P78423 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CX3CL1P78423 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CX3CL1P78423 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.05□□□□□ -1.92
CX3CL1P78423 Y_RNA.517-201ENST00000384551 106 ntBASIC3.05□□□□□ -1.92
CX3CL1P78423 AP000567.1-201ENST00000406413 156 ntBASIC3.05□□□□□ -1.92
CX3CL1P78423 HSPE1P8-201ENST00000406997 288 ntBASIC3.05□□□□□ -1.92
CX3CL1P78423 PIGFP2-201ENST00000421400 651 ntBASIC3.05□□□□□ -1.92
CX3CL1P78423 RPL21P109-201ENST00000422213 475 ntBASIC3.05□□□□□ -1.92
CX3CL1P78423 AC091390.3-201ENST00000426478 338 ntBASIC3.05□□□□□ -1.92
CX3CL1P78423 AC133104.1-201ENST00000429100 218 ntBASIC3.05□□□□□ -1.92
CX3CL1P78423 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.05□□□□□ -1.92
CX3CL1P78423 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.05□□□□□ -1.92
CX3CL1P78423 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.05□□□□□ -1.92
CX3CL1P78423 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.05□□□□□ -1.92
CX3CL1P78423 AL136097.1-201ENST00000456945 913 ntBASIC3.05□□□□□ -1.92
CX3CL1P78423 CEACAMP4-201ENST00000457676 421 ntBASIC3.05□□□□□ -1.92
CX3CL1P78423 SNORD97-201ENST00000459187 142 ntBASIC3.05□□□□□ -1.92
CX3CL1P78423 RNU7-170P-201ENST00000459303 61 ntBASIC3.05□□□□□ -1.92
CX3CL1P78423 AC068587.1-201ENST00000483613 781 ntBASIC3.05□□□□□ -1.92
CX3CL1P78423 AC011825.1-201ENST00000484967 388 ntBASIC3.05□□□□□ -1.92
CX3CL1P78423 AL358832.1-201ENST00000497800 389 ntBASIC3.05□□□□□ -1.92
CX3CL1P78423 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.05□□□□□ -1.92
CX3CL1P78423 ARL2BPP6-201ENST00000512757 439 ntBASIC3.05□□□□□ -1.92
CX3CL1P78423 RNU2-10P-201ENST00000516375 211 ntBASIC3.05□□□□□ -1.92
CX3CL1P78423 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.05□□□□□ -1.92
CX3CL1P78423 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CX3CL1P78423 AC022880.1-201ENST00000534017 973 ntBASIC3.05□□□□□ -1.92
CX3CL1P78423 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.05□□□□□ -1.92
CX3CL1P78423 AC087883.1-201ENST00000551882 391 ntBASIC3.05□□□□□ -1.92
CX3CL1P78423 AC090877.1-201ENST00000561418 344 ntBASIC3.05□□□□□ -1.92
CX3CL1P78423 AL391840.1-201ENST00000571144 367 ntBASIC3.05□□□□□ -1.92
CX3CL1P78423 DPPA3P3-201ENST00000603842 430 ntBASIC3.05□□□□□ -1.92
CX3CL1P78423 AC103710.3-201ENST00000608157 948 ntBASIC3.05□□□□□ -1.92
CX3CL1P78423 AL592295.2-201ENST00000612578 206 ntBASIC3.05□□□□□ -1.92
CX3CL1P78423 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3.05□□□□□ -1.92
CX3CL1P78423 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC3.05□□□□□ -1.92
CX3CL1P78423 AC068724.3-201ENST00000625906 87 ntBASIC3.05□□□□□ -1.92
CX3CL1P78423 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.05□□□□□ -1.92
CX3CL1P78423 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CX3CL1P78423 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.05□□□□□ -1.92
CX3CL1P78423 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CX3CL1P78423 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.05□□□□□ -1.92
CX3CL1P78423 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CX3CL1P78423 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.04□□□□□ -1.92
CX3CL1P78423 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CX3CL1P78423 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CX3CL1P78423 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CX3CL1P78423 RNY1P12-201ENST00000364251 105 ntBASIC3.04□□□□□ -1.92
CX3CL1P78423 RNU6-169P-201ENST00000365336 107 ntBASIC3.04□□□□□ -1.92
CX3CL1P78423 RNU6-282P-201ENST00000365357 103 ntBASIC3.04□□□□□ -1.92
CX3CL1P78423 RNU5E-6P-201ENST00000365574 115 ntBASIC3.04□□□□□ -1.92
CX3CL1P78423 RNU6-328P-201ENST00000390887 106 ntBASIC3.04□□□□□ -1.92
CX3CL1P78423 HLFP1-201ENST00000402375 499 ntBASIC3.04□□□□□ -1.92
CX3CL1P78423 NDUFS5P1-201ENST00000405668 289 ntBASIC3.04□□□□□ -1.92
CX3CL1P78423 AL591034.1-201ENST00000407447 340 ntBASIC3.04□□□□□ -1.92
CX3CL1P78423 SNORA3.3-201ENST00000408712 125 ntBASIC3.04□□□□□ -1.92
CX3CL1P78423 BX842559.1-201ENST00000419615 532 ntBASIC3.04□□□□□ -1.92
CX3CL1P78423 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.04□□□□□ -1.92
CX3CL1P78423 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.04□□□□□ -1.92
CX3CL1P78423 AC002075.2-201ENST00000425207 252 ntBASIC3.04□□□□□ -1.92
CX3CL1P78423 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC3.04□□□□□ -1.92
CX3CL1P78423 AC104651.1-201ENST00000427559 735 ntBASIC3.04□□□□□ -1.92
CX3CL1P78423 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.04□□□□□ -1.92
CX3CL1P78423 AL356867.1-201ENST00000429623 299 ntBASIC3.04□□□□□ -1.92
CX3CL1P78423 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.04□□□□□ -1.92
CX3CL1P78423 Z74696.2-201ENST00000436514 498 ntBASIC3.04□□□□□ -1.92
CX3CL1P78423 NDUFB4P6-201ENST00000436819 366 ntBASIC3.04□□□□□ -1.92
CX3CL1P78423 NANOGNBP1-201ENST00000448444 480 ntBASIC3.04□□□□□ -1.92
CX3CL1P78423 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.04□□□□□ -1.92
CX3CL1P78423 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.04□□□□□ -1.92
CX3CL1P78423 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.04□□□□□ -1.92
CX3CL1P78423 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.04□□□□□ -1.92
CX3CL1P78423 C1DP4-201ENST00000455429 424 ntBASIC3.04□□□□□ -1.92
CX3CL1P78423 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.04□□□□□ -1.92
CX3CL1P78423 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.04□□□□□ -1.92
CX3CL1P78423 AC004801.2-202ENST00000463559 283 ntBASIC3.04□□□□□ -1.92
CX3CL1P78423 RN7SL132P-201ENST00000478131 296 ntBASIC3.04□□□□□ -1.92
CX3CL1P78423 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.04□□□□□ -1.92
CX3CL1P78423 RN7SL323P-201ENST00000494712 295 ntBASIC3.04□□□□□ -1.92
CX3CL1P78423 UBE2CP3-201ENST00000502715 450 ntBASIC3.04□□□□□ -1.92
CX3CL1P78423 AC105252.1-201ENST00000503089 286 ntBASIC3.04□□□□□ -1.92
CX3CL1P78423 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.04□□□□□ -1.92
CX3CL1P78423 AC091133.4-201ENST00000511142 308 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms