Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AC010342.1-201ENST00000514047 877 ntBASIC4.19□□□□□ -1.74
RHBDL3P58872 FABP5P5-201ENST00000515537 406 ntBASIC4.19□□□□□ -1.74
RHBDL3P58872 AC022878.1-201ENST00000530684 149 ntBASIC4.19□□□□□ -1.74
RHBDL3P58872 AC123904.2-201ENST00000548059 300 ntBASIC4.19□□□□□ -1.74
RHBDL3P58872 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC4.19□□□□□ -1.74
RHBDL3P58872 ACTR3BP3-201ENST00000565577 979 ntBASIC4.19□□□□□ -1.74
RHBDL3P58872 HMGB1P6-201ENST00000569046 646 ntBASIC4.19□□□□□ -1.74
RHBDL3P58872 ABBA01006766.1-201ENST00000584728 294 ntBASIC4.19□□□□□ -1.74
RHBDL3P58872 KLKP1-201ENST00000595979 403 ntBASIC4.19□□□□□ -1.74
RHBDL3P58872 AL590229.1-201ENST00000603497 542 ntBASIC4.19□□□□□ -1.74
RHBDL3P58872 AC105129.3-201ENST00000605455 485 ntBASIC4.19□□□□□ -1.74
RHBDL3P58872 BX664608.1-201ENST00000610519 487 ntBASIC4.19□□□□□ -1.74
RHBDL3P58872 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.19□□□□□ -1.74
RHBDL3P58872 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.19□□□□□ -1.74
RHBDL3P58872 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
RHBDL3P58872 AC092104.1-201ENST00000497346 1441 ntBASIC4.19□□□□□ -1.74
RHBDL3P58872 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.18□□□□□ -1.74
RHBDL3P58872 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
RHBDL3P58872 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
RHBDL3P58872 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
RHBDL3P58872 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
RHBDL3P58872 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
RHBDL3P58872 RNU6-525P-201ENST00000363685 104 ntBASIC4.18□□□□□ -1.74
RHBDL3P58872 AL359634.1-202ENST00000404721 284 ntBASIC4.18□□□□□ -1.74
RHBDL3P58872 Y_RNA.598-201ENST00000410480 95 ntBASIC4.18□□□□□ -1.74
RHBDL3P58872 RNU2-8P-201ENST00000410727 190 ntBASIC4.18□□□□□ -1.74
RHBDL3P58872 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.18□□□□□ -1.74
RHBDL3P58872 AL512844.2-201ENST00000433990 593 ntBASIC4.18□□□□□ -1.74
RHBDL3P58872 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.18□□□□□ -1.74
RHBDL3P58872 Z82210.1-201ENST00000440037 231 ntBASIC4.18□□□□□ -1.74
RHBDL3P58872 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.18□□□□□ -1.74
RHBDL3P58872 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC4.18□□□□□ -1.74
RHBDL3P58872 AC013267.1-201ENST00000458227 267 ntBASIC4.18□□□□□ -1.74
RHBDL3P58872 RPL37P6-201ENST00000460682 294 ntBASIC4.18□□□□□ -1.74
RHBDL3P58872 RPL21P10-201ENST00000463521 490 ntBASIC4.18□□□□□ -1.74
RHBDL3P58872 AC010631.1-201ENST00000474150 156 ntBASIC4.18□□□□□ -1.74
RHBDL3P58872 AC010265.1-201ENST00000513509 211 ntBASIC4.18□□□□□ -1.74
RHBDL3P58872 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.18□□□□□ -1.74
RHBDL3P58872 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.18□□□□□ -1.74
RHBDL3P58872 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC4.18□□□□□ -1.74
RHBDL3P58872 AC011979.2-201ENST00000527568 352 ntBASIC4.18□□□□□ -1.74
RHBDL3P58872 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4.18□□□□□ -1.74
RHBDL3P58872 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.18□□□□□ -1.74
RHBDL3P58872 TRAV28-201ENST00000557548 323 ntBASIC4.18□□□□□ -1.74
RHBDL3P58872 AC034105.3-201ENST00000565294 442 ntBASIC4.18□□□□□ -1.74
RHBDL3P58872 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.18□□□□□ -1.74
RHBDL3P58872 AC025048.6-202ENST00000627667 438 ntBASIC4.18□□□□□ -1.74
RHBDL3P58872 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
RHBDL3P58872 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
RHBDL3P58872 AL049641.1-201ENST00000441055 1948 ntBASIC4.18□□□□□ -1.74
RHBDL3P58872 FAM35DP-201ENST00000323387 2712 ntBASIC4.18□□□□□ -1.74
RHBDL3P58872 AC233263.6-201ENST00000631132 1963 ntBASIC4.18□□□□□ -1.74
RHBDL3P58872 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.17□□□□□ -1.74
RHBDL3P58872 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
RHBDL3P58872 MIR423-201ENST00000362201 94 ntBASIC4.17□□□□□ -1.74
RHBDL3P58872 RNU4-91P-201ENST00000364778 135 ntBASIC4.17□□□□□ -1.74
RHBDL3P58872 HMGN2P8-201ENST00000391458 268 ntBASIC4.17□□□□□ -1.74
RHBDL3P58872 RN7SKP111-201ENST00000410349 271 ntBASIC4.17□□□□□ -1.74
RHBDL3P58872 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RHBDL3P58872 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.17□□□□□ -1.74
RHBDL3P58872 AC090960.1-201ENST00000421072 306 ntBASIC4.17□□□□□ -1.74
RHBDL3P58872 MTND1P26-201ENST00000440488 538 ntBASIC4.17□□□□□ -1.74
RHBDL3P58872 COX6CP2-201ENST00000444980 225 ntBASIC4.17□□□□□ -1.74
RHBDL3P58872 AC016696.1-201ENST00000446949 318 ntBASIC4.17□□□□□ -1.74
RHBDL3P58872 AC020550.1-201ENST00000447385 163 ntBASIC4.17□□□□□ -1.74
RHBDL3P58872 AC115115.1-201ENST00000449927 248 ntBASIC4.17□□□□□ -1.74
RHBDL3P58872 MTND1P12-201ENST00000455231 147 ntBASIC4.17□□□□□ -1.74
RHBDL3P58872 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC4.17□□□□□ -1.74
RHBDL3P58872 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RHBDL3P58872 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.17□□□□□ -1.74
RHBDL3P58872 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC4.17□□□□□ -1.74
RHBDL3P58872 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.17□□□□□ -1.74
RHBDL3P58872 AC026427.2-201ENST00000506228 536 ntBASIC4.17□□□□□ -1.74
RHBDL3P58872 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.17□□□□□ -1.74
RHBDL3P58872 MTND5P13-201ENST00000513046 1079 ntBASIC4.17□□□□□ -1.74
RHBDL3P58872 AP002748.2-201ENST00000528671 348 ntBASIC4.17□□□□□ -1.74
RHBDL3P58872 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.17□□□□□ -1.74
RHBDL3P58872 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.17□□□□□ -1.74
RHBDL3P58872 AC067852.3-201ENST00000589177 561 ntBASIC4.17□□□□□ -1.74
RHBDL3P58872 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.17□□□□□ -1.74
RHBDL3P58872 AC012065.4-201ENST00000602445 679 ntBASIC4.17□□□□□ -1.74
RHBDL3P58872 AL161729.4-201ENST00000604650 476 ntBASIC4.17□□□□□ -1.74
RHBDL3P58872 YPEL5P2-201ENST00000605553 359 ntBASIC4.17□□□□□ -1.74
RHBDL3P58872 AC104010.1-201ENST00000616889 150 ntBASIC4.17□□□□□ -1.74
RHBDL3P58872 AC092140.2-201ENST00000618027 521 ntBASIC4.17□□□□□ -1.74
RHBDL3P58872 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.17□□□□□ -1.74
RHBDL3P58872 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RHBDL3P58872 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RHBDL3P58872 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
RHBDL3P58872 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
RHBDL3P58872 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
RHBDL3P58872 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.17□□□□□ -1.74
RHBDL3P58872 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.17□□□□□ -1.74
RHBDL3P58872 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RHBDL3P58872 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
RHBDL3P58872 AC018555.1-201ENST00000567548 1980 ntBASIC4.16□□□□□ -1.74
RHBDL3P58872 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
RHBDL3P58872 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
RHBDL3P58872 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.16□□□□□ -1.74
RHBDL3P58872 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms