Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 AC034268.2-201ENST00000571784 482 ntBASIC3.1□□□□□ -1.91
PEX3P56589 AC011260.1-201ENST00000578420 472 ntBASIC3.1□□□□□ -1.91
PEX3P56589 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.1□□□□□ -1.91
PEX3P56589 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.1□□□□□ -1.91
PEX3P56589 AC025811.1-201ENST00000604312 472 ntBASIC3.1□□□□□ -1.91
PEX3P56589 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.1□□□□□ -1.91
PEX3P56589 AL137843.1-201ENST00000605078 385 ntBASIC3.1□□□□□ -1.91
PEX3P56589 BCRP9-201ENST00000605312 388 ntBASIC3.1□□□□□ -1.91
PEX3P56589 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.1□□□□□ -1.91
PEX3P56589 AC006111.3-201ENST00000622137 383 ntBASIC3.1□□□□□ -1.91
PEX3P56589 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.1□□□□□ -1.91
PEX3P56589 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.1□□□□□ -1.91
PEX3P56589 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PEX3P56589 AL136164.4-201ENST00000625013 2135 ntBASIC3.1□□□□□ -1.91
PEX3P56589 RNU6-28P-201ENST00000362378 107 ntBASIC3.09□□□□□ -1.91
PEX3P56589 RNU6-359P-201ENST00000365466 108 ntBASIC3.09□□□□□ -1.91
PEX3P56589 MIR181A2-201ENST00000384863 110 ntBASIC3.09□□□□□ -1.91
PEX3P56589 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.09□□□□□ -1.91
PEX3P56589 AC083875.1-201ENST00000419509 405 ntBASIC3.09□□□□□ -1.91
PEX3P56589 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.09□□□□□ -1.91
PEX3P56589 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.09□□□□□ -1.91
PEX3P56589 AC093151.1-201ENST00000427711 313 ntBASIC3.09□□□□□ -1.91
PEX3P56589 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.09□□□□□ -1.91
PEX3P56589 AC087499.2-201ENST00000432861 149 ntBASIC3.09□□□□□ -1.91
PEX3P56589 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.09□□□□□ -1.91
PEX3P56589 RPS24P13-201ENST00000442520 397 ntBASIC3.09□□□□□ -1.91
PEX3P56589 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.09□□□□□ -1.91
PEX3P56589 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.09□□□□□ -1.91
PEX3P56589 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.09□□□□□ -1.91
PEX3P56589 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.09□□□□□ -1.91
PEX3P56589 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.09□□□□□ -1.91
PEX3P56589 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.09□□□□□ -1.91
PEX3P56589 AC010486.2-201ENST00000505572 483 ntBASIC3.09□□□□□ -1.91
PEX3P56589 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.09□□□□□ -1.91
PEX3P56589 AC006390.1-201ENST00000508068 283 ntBASIC3.09□□□□□ -1.91
PEX3P56589 AC005178.1-201ENST00000508392 440 ntBASIC3.09□□□□□ -1.91
PEX3P56589 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.09□□□□□ -1.91
PEX3P56589 AC026801.2-201ENST00000515352 425 ntBASIC3.09□□□□□ -1.91
PEX3P56589 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.09□□□□□ -1.91
PEX3P56589 AP003497.1-201ENST00000528472 562 ntBASIC3.09□□□□□ -1.91
PEX3P56589 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.09□□□□□ -1.91
PEX3P56589 AC079600.2-201ENST00000550076 130 ntBASIC3.09□□□□□ -1.91
PEX3P56589 AC055876.1-202ENST00000567053 138 ntBASIC3.09□□□□□ -1.91
PEX3P56589 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.09□□□□□ -1.91
PEX3P56589 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.09□□□□□ -1.91
PEX3P56589 AC090616.2-202ENST00000584248 222 ntBASIC3.09□□□□□ -1.91
PEX3P56589 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.09□□□□□ -1.91
PEX3P56589 AC091304.6-201ENST00000619761 202 ntBASIC3.09□□□□□ -1.91
PEX3P56589 AC010338.1-201ENST00000621823 717 ntBASIC3.09□□□□□ -1.91
PEX3P56589 PCMTD1P7-201ENST00000634506 357 ntBASIC3.09□□□□□ -1.91
PEX3P56589 AC084035.1-201ENST00000634543 607 ntBASIC3.09□□□□□ -1.91
PEX3P56589 AC099063.3-201ENST00000642066 185 ntBASIC3.09□□□□□ -1.91
PEX3P56589 AC103988.1-201ENST00000566382 2177 ntBASIC3.09□□□□□ -1.91
PEX3P56589 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.09□□□□□ -1.92
PEX3P56589 API5P2-201ENST00000397055 1498 ntBASIC3.09□□□□□ -1.92
PEX3P56589 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
PEX3P56589 AC092447.10-201ENST00000620607 1652 ntBASIC3.08□□□□□ -1.92
PEX3P56589 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.08□□□□□ -1.92
PEX3P56589 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.08□□□□□ -1.92
PEX3P56589 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PEX3P56589 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.08□□□□□ -1.92
PEX3P56589 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PEX3P56589 RPL9P7-201ENST00000330965 580 ntBASIC3.08□□□□□ -1.92
PEX3P56589 RNU6-289P-201ENST00000364093 107 ntBASIC3.08□□□□□ -1.92
PEX3P56589 RNU6-7-201ENST00000364784 107 ntBASIC3.08□□□□□ -1.92
PEX3P56589 RNU6-8-201ENST00000365467 107 ntBASIC3.08□□□□□ -1.92
PEX3P56589 AL122016.1-201ENST00000403365 367 ntBASIC3.08□□□□□ -1.92
PEX3P56589 USP9YP26-201ENST00000421008 661 ntBASIC3.08□□□□□ -1.92
PEX3P56589 AL365203.2-201ENST00000423444 196 ntBASIC3.08□□□□□ -1.92
PEX3P56589 RPL7P46-201ENST00000425129 740 ntBASIC3.08□□□□□ -1.92
PEX3P56589 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.08□□□□□ -1.92
PEX3P56589 RPS29P6-201ENST00000438196 145 ntBASIC3.08□□□□□ -1.92
PEX3P56589 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.08□□□□□ -1.92
PEX3P56589 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.08□□□□□ -1.92
PEX3P56589 AP000542.1-201ENST00000448473 371 ntBASIC3.08□□□□□ -1.92
PEX3P56589 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.08□□□□□ -1.92
PEX3P56589 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.08□□□□□ -1.92
PEX3P56589 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.08□□□□□ -1.92
PEX3P56589 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.08□□□□□ -1.92
PEX3P56589 AP001486.1-201ENST00000463339 476 ntBASIC3.08□□□□□ -1.92
PEX3P56589 AC010285.1-201ENST00000470580 392 ntBASIC3.08□□□□□ -1.92
PEX3P56589 AC012181.1-201ENST00000479895 423 ntBASIC3.08□□□□□ -1.92
PEX3P56589 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PEX3P56589 AC017037.2-201ENST00000513850 890 ntBASIC3.08□□□□□ -1.92
PEX3P56589 RN7SKP132-201ENST00000516001 208 ntBASIC3.08□□□□□ -1.92
PEX3P56589 RN7SKP244-201ENST00000516513 307 ntBASIC3.08□□□□□ -1.92
PEX3P56589 RN7SKP282-201ENST00000516824 299 ntBASIC3.08□□□□□ -1.92
PEX3P56589 RNU6-714P-201ENST00000516963 103 ntBASIC3.08□□□□□ -1.92
PEX3P56589 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.08□□□□□ -1.92
PEX3P56589 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PEX3P56589 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.08□□□□□ -1.92
PEX3P56589 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.08□□□□□ -1.92
PEX3P56589 AC090888.1-201ENST00000561335 1141 ntBASIC3.08□□□□□ -1.92
PEX3P56589 AL157394.1-201ENST00000562983 1224 ntBASIC3.08□□□□□ -1.92
PEX3P56589 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.08□□□□□ -1.92
PEX3P56589 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.08□□□□□ -1.92
PEX3P56589 BBIP1P1-201ENST00000602999 279 ntBASIC3.08□□□□□ -1.92
PEX3P56589 AL627309.6-201ENST00000606857 840 ntBASIC3.08□□□□□ -1.92
PEX3P56589 MIR7106-201ENST00000612419 65 ntBASIC3.08□□□□□ -1.92
PEX3P56589 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 251.2 ms