Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.73□□□□□ -1.81
HDAC4P56524 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.73□□□□□ -1.81
HDAC4P56524 AC009902.3-201ENST00000606235 2172 ntBASIC3.73□□□□□ -1.81
HDAC4P56524 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.73□□□□□ -1.81
HDAC4P56524 AC118273.1-201ENST00000525324 3006 ntBASIC3.73□□□□□ -1.81
HDAC4P56524 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HDAC4P56524 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HDAC4P56524 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.72□□□□□ -1.81
HDAC4P56524 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HDAC4P56524 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.72□□□□□ -1.81
HDAC4P56524 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.72□□□□□ -1.81
HDAC4P56524 MTCO1P9-201ENST00000505577 1534 ntBASIC3.72□□□□□ -1.81
HDAC4P56524 FRG1BP-201ENST00000278882 761 ntBASIC3.72□□□□□ -1.81
HDAC4P56524 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
HDAC4P56524 Y_RNA.111-201ENST00000363248 100 ntBASIC3.72□□□□□ -1.81
HDAC4P56524 Y_RNA.517-201ENST00000384551 106 ntBASIC3.72□□□□□ -1.81
HDAC4P56524 RNU6-114P-201ENST00000384704 105 ntBASIC3.72□□□□□ -1.81
HDAC4P56524 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
HDAC4P56524 AP000567.1-201ENST00000406413 156 ntBASIC3.72□□□□□ -1.81
HDAC4P56524 CCNG1P1-201ENST00000406783 885 ntBASIC3.72□□□□□ -1.81
HDAC4P56524 AC017079.2-201ENST00000416102 485 ntBASIC3.72□□□□□ -1.81
HDAC4P56524 CCDC58P2-201ENST00000417131 366 ntBASIC3.72□□□□□ -1.81
HDAC4P56524 DBIP2-201ENST00000419076 262 ntBASIC3.72□□□□□ -1.81
HDAC4P56524 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.72□□□□□ -1.81
HDAC4P56524 BEND7P1-201ENST00000422058 457 ntBASIC3.72□□□□□ -1.81
HDAC4P56524 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.72□□□□□ -1.81
HDAC4P56524 AC010975.2-201ENST00000427781 588 ntBASIC3.72□□□□□ -1.81
HDAC4P56524 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.72□□□□□ -1.81
HDAC4P56524 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.72□□□□□ -1.81
HDAC4P56524 RPL22P17-201ENST00000438729 315 ntBASIC3.72□□□□□ -1.81
HDAC4P56524 MTND6P13-201ENST00000443510 523 ntBASIC3.72□□□□□ -1.81
HDAC4P56524 AC244505.5-201ENST00000443639 207 ntBASIC3.72□□□□□ -1.81
HDAC4P56524 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.72□□□□□ -1.81
HDAC4P56524 ELOCP30-201ENST00000447108 299 ntBASIC3.72□□□□□ -1.81
HDAC4P56524 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HDAC4P56524 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.72□□□□□ -1.81
HDAC4P56524 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.72□□□□□ -1.81
HDAC4P56524 RPL23AP31-201ENST00000456160 467 ntBASIC3.72□□□□□ -1.81
HDAC4P56524 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.72□□□□□ -1.81
HDAC4P56524 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HDAC4P56524 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.72□□□□□ -1.81
HDAC4P56524 AC123904.2-201ENST00000548059 300 ntBASIC3.72□□□□□ -1.81
HDAC4P56524 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.72□□□□□ -1.81
HDAC4P56524 MIR3913-1-201ENST00000577744 102 ntBASIC3.72□□□□□ -1.81
HDAC4P56524 FAM60BP-201ENST00000578364 658 ntBASIC3.72□□□□□ -1.81
HDAC4P56524 MIR4738-201ENST00000579134 87 ntBASIC3.72□□□□□ -1.81
HDAC4P56524 AC060771.1-201ENST00000582031 164 ntBASIC3.72□□□□□ -1.81
HDAC4P56524 HMGN1P30-201ENST00000589286 268 ntBASIC3.72□□□□□ -1.81
HDAC4P56524 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.72□□□□□ -1.81
HDAC4P56524 BNIP3P8-201ENST00000597863 560 ntBASIC3.72□□□□□ -1.81
HDAC4P56524 AC068790.6-201ENST00000602558 258 ntBASIC3.72□□□□□ -1.81
HDAC4P56524 AC012468.1-201ENST00000604888 430 ntBASIC3.72□□□□□ -1.81
HDAC4P56524 NDUFA8P1-201ENST00000605525 367 ntBASIC3.72□□□□□ -1.81
HDAC4P56524 AC108747.1-201ENST00000609508 535 ntBASIC3.72□□□□□ -1.81
HDAC4P56524 AC096577.2-201ENST00000611455 153 ntBASIC3.72□□□□□ -1.81
HDAC4P56524 AC095031.1-201ENST00000623685 672 ntBASIC3.72□□□□□ -1.81
HDAC4P56524 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.72□□□□□ -1.81
HDAC4P56524 PWAR6-201ENST00000552334 4618 ntBASIC3.72□□□□□ -1.81
HDAC4P56524 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.72□□□□□ -1.81
HDAC4P56524 AC073346.2-201ENST00000624724 2058 ntBASIC3.72□□□□□ -1.81
HDAC4P56524 MTND5P29-201ENST00000458676 1807 ntBASIC3.72□□□□□ -1.81
HDAC4P56524 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HDAC4P56524 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.72□□□□□ -1.81
HDAC4P56524 AL645937.1-201ENST00000641739 1652 ntBASIC3.71□□□□□ -1.81
HDAC4P56524 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.71□□□□□ -1.82
HDAC4P56524 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HDAC4P56524 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HDAC4P56524 RNU6-173P-201ENST00000364215 104 ntBASIC3.71□□□□□ -1.82
HDAC4P56524 SNORA5A-201ENST00000384111 134 ntBASIC3.71□□□□□ -1.82
HDAC4P56524 MIR34B-201ENST00000385076 84 ntBASIC3.71□□□□□ -1.82
HDAC4P56524 RN7SKP53-201ENST00000411337 315 ntBASIC3.71□□□□□ -1.82
HDAC4P56524 RPS3AP3-201ENST00000411933 242 ntBASIC3.71□□□□□ -1.82
HDAC4P56524 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.71□□□□□ -1.82
HDAC4P56524 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.71□□□□□ -1.82
HDAC4P56524 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.71□□□□□ -1.82
HDAC4P56524 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.71□□□□□ -1.82
HDAC4P56524 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC3.71□□□□□ -1.82
HDAC4P56524 AL121871.1-201ENST00000443413 436 ntBASIC3.71□□□□□ -1.82
HDAC4P56524 RPS29P31-201ENST00000446147 164 ntBASIC3.71□□□□□ -1.82
HDAC4P56524 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.71□□□□□ -1.82
HDAC4P56524 PDSS1P2-201ENST00000449397 678 ntBASIC3.71□□□□□ -1.82
HDAC4P56524 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.71□□□□□ -1.82
HDAC4P56524 AL033528.1-201ENST00000453780 140 ntBASIC3.71□□□□□ -1.82
HDAC4P56524 AC234775.1-201ENST00000454247 670 ntBASIC3.71□□□□□ -1.82
HDAC4P56524 SNORA59A-201ENST00000459326 152 ntBASIC3.71□□□□□ -1.82
HDAC4P56524 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.71□□□□□ -1.82
HDAC4P56524 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.71□□□□□ -1.82
HDAC4P56524 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.71□□□□□ -1.82
HDAC4P56524 RPL37P25-201ENST00000507308 276 ntBASIC3.71□□□□□ -1.82
HDAC4P56524 RNU6-720P-201ENST00000516363 108 ntBASIC3.71□□□□□ -1.82
HDAC4P56524 RNU6-201P-201ENST00000517100 61 ntBASIC3.71□□□□□ -1.82
HDAC4P56524 AP003467.2-201ENST00000520175 319 ntBASIC3.71□□□□□ -1.82
HDAC4P56524 AC103783.1-201ENST00000520506 373 ntBASIC3.71□□□□□ -1.82
HDAC4P56524 AP003181.2-201ENST00000528941 181 ntBASIC3.71□□□□□ -1.82
HDAC4P56524 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.71□□□□□ -1.82
HDAC4P56524 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.71□□□□□ -1.82
HDAC4P56524 RPL21P5-201ENST00000554662 472 ntBASIC3.71□□□□□ -1.82
HDAC4P56524 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.71□□□□□ -1.82
HDAC4P56524 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.71□□□□□ -1.82
HDAC4P56524 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms