Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC007619.2-201ENST00000605743 379 ntBASIC3.14□□□□□ -1.91
VCPP55072 AC080013.4-201ENST00000607624 649 ntBASIC3.14□□□□□ -1.91
VCPP55072 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.14□□□□□ -1.91
VCPP55072 AC025588.4-201ENST00000615802 908 ntBASIC3.14□□□□□ -1.91
VCPP55072 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.14□□□□□ -1.91
VCPP55072 AC243829.7-201ENST00000633081 225 ntBASIC3.14□□□□□ -1.91
VCPP55072 AC006927.4-201ENST00000639187 543 ntBASIC3.14□□□□□ -1.91
VCPP55072 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
VCPP55072 AL079343.1-201ENST00000572358 1771 ntBASIC3.14□□□□□ -1.91
VCPP55072 ASNSP3-201ENST00000451989 1306 ntBASIC3.14□□□□□ -1.91
VCPP55072 AP000776.1-201ENST00000530032 1663 ntBASIC3.14□□□□□ -1.91
VCPP55072 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
VCPP55072 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
VCPP55072 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
VCPP55072 RNU6-1027P-201ENST00000383998 107 ntBASIC3.13□□□□□ -1.91
VCPP55072 SNORA1.3-201ENST00000384676 136 ntBASIC3.13□□□□□ -1.91
VCPP55072 DHFRP6-201ENST00000401776 268 ntBASIC3.13□□□□□ -1.91
VCPP55072 HMGB1P17-201ENST00000403495 628 ntBASIC3.13□□□□□ -1.91
VCPP55072 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
VCPP55072 BMS1P22-201ENST00000414726 313 ntBASIC3.13□□□□□ -1.91
VCPP55072 HMGB1P49-201ENST00000418882 569 ntBASIC3.13□□□□□ -1.91
VCPP55072 MTCO2P17-201ENST00000424336 677 ntBASIC3.13□□□□□ -1.91
VCPP55072 AC093151.1-201ENST00000427711 313 ntBASIC3.13□□□□□ -1.91
VCPP55072 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC3.13□□□□□ -1.91
VCPP55072 RPL37P4-201ENST00000448908 268 ntBASIC3.13□□□□□ -1.91
VCPP55072 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.13□□□□□ -1.91
VCPP55072 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.13□□□□□ -1.91
VCPP55072 AC117440.1-201ENST00000474107 571 ntBASIC3.13□□□□□ -1.91
VCPP55072 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.13□□□□□ -1.91
VCPP55072 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.13□□□□□ -1.91
VCPP55072 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.13□□□□□ -1.91
VCPP55072 AC021146.8-201ENST00000507455 733 ntBASIC3.13□□□□□ -1.91
VCPP55072 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC3.13□□□□□ -1.91
VCPP55072 AC010587.2-201ENST00000511727 448 ntBASIC3.13□□□□□ -1.91
VCPP55072 AC006499.2-201ENST00000513470 337 ntBASIC3.13□□□□□ -1.91
VCPP55072 OR5AK1P-201ENST00000524837 922 ntBASIC3.13□□□□□ -1.91
VCPP55072 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.13□□□□□ -1.91
VCPP55072 AL391001.1-201ENST00000602747 715 ntBASIC3.13□□□□□ -1.91
VCPP55072 AC092106.3-201ENST00000611308 722 ntBASIC3.13□□□□□ -1.91
VCPP55072 AC009159.1-201ENST00000618386 642 ntBASIC3.13□□□□□ -1.91
VCPP55072 AL590808.1-201ENST00000618696 141 ntBASIC3.13□□□□□ -1.91
VCPP55072 AC004009.2-201ENST00000623016 728 ntBASIC3.13□□□□□ -1.91
VCPP55072 AC231657.1-201ENST00000624313 397 ntBASIC3.13□□□□□ -1.91
VCPP55072 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
VCPP55072 ZNF876P-202ENST00000398732 1485 ntBASIC3.13□□□□□ -1.91
VCPP55072 AL513185.3-201ENST00000433335 1300 ntBASIC3.13□□□□□ -1.91
VCPP55072 ELF2P3-201ENST00000445099 1506 ntBASIC3.13□□□□□ -1.91
VCPP55072 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.13□□□□□ -1.91
VCPP55072 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
VCPP55072 AC005539.1-201ENST00000443768 1479 ntBASIC3.12□□□□□ -1.91
VCPP55072 RNU6-799P-201ENST00000363567 107 ntBASIC3.12□□□□□ -1.91
VCPP55072 U3.12-201ENST00000364498 214 ntBASIC3.12□□□□□ -1.91
VCPP55072 RNU6-83P-201ENST00000384568 112 ntBASIC3.12□□□□□ -1.91
VCPP55072 RPL23AP29-201ENST00000397284 453 ntBASIC3.12□□□□□ -1.91
VCPP55072 MIR1284-201ENST00000408337 120 ntBASIC3.12□□□□□ -1.91
VCPP55072 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.12□□□□□ -1.91
VCPP55072 RNA5SP344-201ENST00000411081 104 ntBASIC3.12□□□□□ -1.91
VCPP55072 AC019178.2-201ENST00000423595 505 ntBASIC3.12□□□□□ -1.91
VCPP55072 AC019097.1-201ENST00000424783 735 ntBASIC3.12□□□□□ -1.91
VCPP55072 AL590233.1-201ENST00000430017 456 ntBASIC3.12□□□□□ -1.91
VCPP55072 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.12□□□□□ -1.91
VCPP55072 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
VCPP55072 Z73417.1-201ENST00000447373 778 ntBASIC3.12□□□□□ -1.91
VCPP55072 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.12□□□□□ -1.91
VCPP55072 SUMO2P2-201ENST00000456482 255 ntBASIC3.12□□□□□ -1.91
VCPP55072 AL359385.1-201ENST00000456509 365 ntBASIC3.12□□□□□ -1.91
VCPP55072 RPL7P18-201ENST00000478965 734 ntBASIC3.12□□□□□ -1.91
VCPP55072 AP004217.1-201ENST00000480579 346 ntBASIC3.12□□□□□ -1.91
VCPP55072 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.12□□□□□ -1.91
VCPP55072 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC3.12□□□□□ -1.91
VCPP55072 RN7SKP265-201ENST00000516448 223 ntBASIC3.12□□□□□ -1.91
VCPP55072 FAM60DP-201ENST00000524174 632 ntBASIC3.12□□□□□ -1.91
VCPP55072 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.12□□□□□ -1.91
VCPP55072 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.12□□□□□ -1.91
VCPP55072 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.12□□□□□ -1.91
VCPP55072 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.12□□□□□ -1.91
VCPP55072 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.12□□□□□ -1.91
VCPP55072 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.12□□□□□ -1.91
VCPP55072 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.12□□□□□ -1.91
VCPP55072 AC061975.8-201ENST00000587058 721 ntBASIC3.12□□□□□ -1.91
VCPP55072 AC004987.4-201ENST00000603383 338 ntBASIC3.12□□□□□ -1.91
VCPP55072 AC098826.3-201ENST00000603823 466 ntBASIC3.12□□□□□ -1.91
VCPP55072 AC007318.2-201ENST00000620999 243 ntBASIC3.12□□□□□ -1.91
VCPP55072 AP002782.1-201ENST00000623107 614 ntBASIC3.12□□□□□ -1.91
VCPP55072 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.12□□□□□ -1.91
VCPP55072 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
VCPP55072 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
VCPP55072 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.11□□□□□ -1.91
VCPP55072 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
VCPP55072 RNU2-52P-201ENST00000410680 190 ntBASIC3.11□□□□□ -1.91
VCPP55072 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.11□□□□□ -1.91
VCPP55072 TMEM167AP1-201ENST00000423409 219 ntBASIC3.11□□□□□ -1.91
VCPP55072 RPS25P9-201ENST00000435591 252 ntBASIC3.11□□□□□ -1.91
VCPP55072 AC004866.2-201ENST00000438285 481 ntBASIC3.11□□□□□ -1.91
VCPP55072 MTND3P1-201ENST00000441336 220 ntBASIC3.11□□□□□ -1.91
VCPP55072 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
VCPP55072 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.11□□□□□ -1.91
VCPP55072 RPL21P41-201ENST00000459863 264 ntBASIC3.11□□□□□ -1.91
VCPP55072 AC097493.1-201ENST00000463958 372 ntBASIC3.11□□□□□ -1.91
VCPP55072 AC104090.1-201ENST00000506341 1171 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms