Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 UBE2Q2P6-201ENST00000612666 153 ntBASIC1.64□□□□□ -2.15
RPL28P46779 MIR7515-201ENST00000637837 67 ntBASIC1.64□□□□□ -2.15
RPL28P46779 CCT4P2-201ENST00000233836 1548 ntBASIC1.64□□□□□ -2.15
RPL28P46779 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC1.64□□□□□ -2.15
RPL28P46779 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
RPL28P46779 OR4G2P-202ENST00000641004 1759 ntBASIC1.64□□□□□ -2.15
RPL28P46779 AC005832.2-201ENST00000538921 1430 ntBASIC1.64□□□□□ -2.15
RPL28P46779 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
RPL28P46779 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
RPL28P46779 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
RPL28P46779 SNORA18.3-201ENST00000384122 132 ntBASIC1.63□□□□□ -2.15
RPL28P46779 RNU6-217P-201ENST00000384164 104 ntBASIC1.63□□□□□ -2.15
RPL28P46779 SNORA41-201ENST00000384675 132 ntBASIC1.63□□□□□ -2.15
RPL28P46779 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
RPL28P46779 HMGB1P17-201ENST00000403495 628 ntBASIC1.63□□□□□ -2.15
RPL28P46779 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC1.63□□□□□ -2.15
RPL28P46779 MORF4L1P6-201ENST00000418771 268 ntBASIC1.63□□□□□ -2.15
RPL28P46779 PPP1R11P2-201ENST00000423543 382 ntBASIC1.63□□□□□ -2.15
RPL28P46779 WARS2P1-201ENST00000429678 537 ntBASIC1.63□□□□□ -2.15
RPL28P46779 AC107083.1-201ENST00000439643 279 ntBASIC1.63□□□□□ -2.15
RPL28P46779 AL158053.1-201ENST00000441503 453 ntBASIC1.63□□□□□ -2.15
RPL28P46779 PIGFP3-201ENST00000441918 722 ntBASIC1.63□□□□□ -2.15
RPL28P46779 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC1.63□□□□□ -2.15
RPL28P46779 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.63□□□□□ -2.15
RPL28P46779 DDX3P2-201ENST00000446138 111 ntBASIC1.63□□□□□ -2.15
RPL28P46779 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC1.63□□□□□ -2.15
RPL28P46779 AL353718.1-201ENST00000451028 517 ntBASIC1.63□□□□□ -2.15
RPL28P46779 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.63□□□□□ -2.15
RPL28P46779 RNU7-26P-201ENST00000458980 63 ntBASIC1.63□□□□□ -2.15
RPL28P46779 AC026410.2-201ENST00000460281 156 ntBASIC1.63□□□□□ -2.15
RPL28P46779 AC078857.1-201ENST00000469870 667 ntBASIC1.63□□□□□ -2.15
RPL28P46779 MRPL42P6-201ENST00000486397 371 ntBASIC1.63□□□□□ -2.15
RPL28P46779 SRI-210ENST00000490437 570 ntTSL 2 BASIC1.63□□□□□ -2.15
RPL28P46779 AC080014.1-201ENST00000496877 1201 ntBASIC1.63□□□□□ -2.15
RPL28P46779 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC1.63□□□□□ -2.15
RPL28P46779 AC114786.4-201ENST00000508771 728 ntBASIC1.63□□□□□ -2.15
RPL28P46779 AC114797.1-201ENST00000514003 728 ntBASIC1.63□□□□□ -2.15
RPL28P46779 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC1.63□□□□□ -2.15
RPL28P46779 SCARNA11.3-201ENST00000517276 130 ntBASIC1.63□□□□□ -2.15
RPL28P46779 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.63□□□□□ -2.15
RPL28P46779 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.63□□□□□ -2.15
RPL28P46779 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.63□□□□□ -2.15
RPL28P46779 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.63□□□□□ -2.15
RPL28P46779 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC1.63□□□□□ -2.15
RPL28P46779 AC125611.1-201ENST00000549563 229 ntBASIC1.63□□□□□ -2.15
RPL28P46779 AC007954.1-201ENST00000554198 494 ntBASIC1.63□□□□□ -2.15
RPL28P46779 AL132857.1-201ENST00000555180 708 ntBASIC1.63□□□□□ -2.15
RPL28P46779 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC1.63□□□□□ -2.15
RPL28P46779 AC087465.1-201ENST00000560574 245 ntBASIC1.63□□□□□ -2.15
RPL28P46779 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.63□□□□□ -2.15
RPL28P46779 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.63□□□□□ -2.15
RPL28P46779 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.63□□□□□ -2.15
RPL28P46779 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.63□□□□□ -2.15
RPL28P46779 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.63□□□□□ -2.15
RPL28P46779 AC004067.1-201ENST00000608733 700 ntBASIC1.63□□□□□ -2.15
RPL28P46779 MTCO1P4-201ENST00000520516 1409 ntBASIC1.63□□□□□ -2.15
RPL28P46779 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC1.63□□□□□ -2.15
RPL28P46779 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
RPL28P46779 ZNF833P-201ENST00000424938 1494 ntBASIC1.63□□□□□ -2.15
RPL28P46779 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC1.62□□□□□ -2.15
RPL28P46779 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
RPL28P46779 ZNF720P1-201ENST00000562403 1939 ntBASIC1.62□□□□□ -2.15
RPL28P46779 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC1.62□□□□□ -2.15
RPL28P46779 SNORD62.1-201ENST00000362541 86 ntBASIC1.62□□□□□ -2.15
RPL28P46779 RNA5SP456-201ENST00000364002 114 ntBASIC1.62□□□□□ -2.15
RPL28P46779 RNA5SP37-201ENST00000365420 130 ntBASIC1.62□□□□□ -2.15
RPL28P46779 SNORA48.2-201ENST00000390926 124 ntBASIC1.62□□□□□ -2.15
RPL28P46779 RNU6-1300P-201ENST00000391046 108 ntBASIC1.62□□□□□ -2.15
RPL28P46779 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.62□□□□□ -2.15
RPL28P46779 Z92545.1-201ENST00000411782 234 ntBASIC1.62□□□□□ -2.15
RPL28P46779 RPS7P9-201ENST00000414704 586 ntBASIC1.62□□□□□ -2.15
RPL28P46779 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.62□□□□□ -2.15
RPL28P46779 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC1.62□□□□□ -2.15
RPL28P46779 AC063976.3-201ENST00000426849 329 ntBASIC1.62□□□□□ -2.15
RPL28P46779 AC092393.1-201ENST00000439625 742 ntBASIC1.62□□□□□ -2.15
RPL28P46779 AC000041.1-201ENST00000439655 175 ntBASIC1.62□□□□□ -2.15
RPL28P46779 Z82210.1-201ENST00000440037 231 ntBASIC1.62□□□□□ -2.15
RPL28P46779 IFNA11P-201ENST00000446352 526 ntBASIC1.62□□□□□ -2.15
RPL28P46779 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
RPL28P46779 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.62□□□□□ -2.15
RPL28P46779 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.62□□□□□ -2.15
RPL28P46779 RPS15AP17-201ENST00000470598 390 ntBASIC1.62□□□□□ -2.15
RPL28P46779 AC138853.1-201ENST00000503549 823 ntBASIC1.62□□□□□ -2.15
RPL28P46779 AC097462.2-201ENST00000504623 481 ntBASIC1.62□□□□□ -2.15
RPL28P46779 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC1.62□□□□□ -2.15
RPL28P46779 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.62□□□□□ -2.15
RPL28P46779 AC026801.2-201ENST00000515352 425 ntBASIC1.62□□□□□ -2.15
RPL28P46779 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.62□□□□□ -2.15
RPL28P46779 SCARNA17.1-201ENST00000516211 143 ntBASIC1.62□□□□□ -2.15
RPL28P46779 SCARNA17.2-201ENST00000516334 143 ntBASIC1.62□□□□□ -2.15
RPL28P46779 AC023632.1-201ENST00000518463 375 ntBASIC1.62□□□□□ -2.15
RPL28P46779 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.62□□□□□ -2.15
RPL28P46779 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.62□□□□□ -2.15
RPL28P46779 OR4R2P-201ENST00000530815 597 ntBASIC1.62□□□□□ -2.15
RPL28P46779 APAF1-207ENST00000547743 651 ntTSL 3 BASIC1.62□□□□□ -2.15
RPL28P46779 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
RPL28P46779 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.62□□□□□ -2.15
RPL28P46779 LARP7P3-201ENST00000579888 337 ntBASIC1.62□□□□□ -2.15
RPL28P46779 MIR5694-201ENST00000581190 76 ntBASIC1.62□□□□□ -2.15
RPL28P46779 HMGN2P15-201ENST00000585707 270 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms