Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 AL157770.1-201ENST00000623049 439 ntBASIC2.42□□□□□ -2.02
SCN4AP35499 AC098679.5-201ENST00000624394 571 ntBASIC2.42□□□□□ -2.02
SCN4AP35499 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
SCN4AP35499 AL109809.4-201ENST00000603520 2185 ntBASIC2.42□□□□□ -2.02
SCN4AP35499 AC010680.1-201ENST00000590024 3590 ntBASIC2.42□□□□□ -2.02
SCN4AP35499 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.42□□□□□ -2.02
SCN4AP35499 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.42□□□□□ -2.02
SCN4AP35499 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
SCN4AP35499 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
SCN4AP35499 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
SCN4AP35499 RNU6-236P-201ENST00000363886 106 ntBASIC2.42□□□□□ -2.02
SCN4AP35499 RNA5SP190-201ENST00000365222 118 ntBASIC2.42□□□□□ -2.02
SCN4AP35499 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC2.42□□□□□ -2.02
SCN4AP35499 RNU6-1226P-201ENST00000384317 107 ntBASIC2.42□□□□□ -2.02
SCN4AP35499 SFR1P1-201ENST00000403720 688 ntBASIC2.42□□□□□ -2.02
SCN4AP35499 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC2.42□□□□□ -2.02
SCN4AP35499 PAICSP7-201ENST00000419829 962 ntBASIC2.42□□□□□ -2.02
SCN4AP35499 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC2.42□□□□□ -2.02
SCN4AP35499 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC2.42□□□□□ -2.02
SCN4AP35499 AL096829.2-201ENST00000446582 742 ntBASIC2.42□□□□□ -2.02
SCN4AP35499 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC2.42□□□□□ -2.02
SCN4AP35499 FCF1P6-201ENST00000456841 595 ntBASIC2.42□□□□□ -2.02
SCN4AP35499 AC090515.1-201ENST00000465295 476 ntBASIC2.42□□□□□ -2.02
SCN4AP35499 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.42□□□□□ -2.02
SCN4AP35499 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC2.42□□□□□ -2.02
SCN4AP35499 AF279873.1-201ENST00000523393 313 ntBASIC2.42□□□□□ -2.02
SCN4AP35499 AP003066.2-201ENST00000529375 555 ntBASIC2.42□□□□□ -2.02
SCN4AP35499 AC087241.2-201ENST00000535801 324 ntBASIC2.42□□□□□ -2.02
SCN4AP35499 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC2.42□□□□□ -2.02
SCN4AP35499 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC2.42□□□□□ -2.02
SCN4AP35499 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.42□□□□□ -2.02
SCN4AP35499 AMZ2P1-203ENST00000565833 850 ntBASIC2.42□□□□□ -2.02
SCN4AP35499 AC008507.2-201ENST00000588402 1176 ntBASIC2.42□□□□□ -2.02
SCN4AP35499 AL355812.1-201ENST00000603215 216 ntBASIC2.42□□□□□ -2.02
SCN4AP35499 AP002802.2-201ENST00000605877 235 ntBASIC2.42□□□□□ -2.02
SCN4AP35499 AC006927.2-201ENST00000639256 389 ntBASIC2.42□□□□□ -2.02
SCN4AP35499 MTND4P35-201ENST00000604257 1375 ntBASIC2.42□□□□□ -2.02
SCN4AP35499 AC131280.1-202ENST00000624067 4211 ntBASIC2.42□□□□□ -2.02
SCN4AP35499 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
SCN4AP35499 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SCN4AP35499 RNA5SP167-201ENST00000365461 116 ntBASIC2.41□□□□□ -2.02
SCN4AP35499 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC2.41□□□□□ -2.02
SCN4AP35499 RNU6-468P-201ENST00000384003 109 ntBASIC2.41□□□□□ -2.02
SCN4AP35499 Y_RNA.540-201ENST00000384638 111 ntBASIC2.41□□□□□ -2.02
SCN4AP35499 MIR16-1-201ENST00000385271 89 ntBASIC2.41□□□□□ -2.02
SCN4AP35499 RPL22P22-201ENST00000395439 379 ntBASIC2.41□□□□□ -2.02
SCN4AP35499 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
SCN4AP35499 MIR1250-201ENST00000408098 113 ntBASIC2.41□□□□□ -2.02
SCN4AP35499 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.41□□□□□ -2.02
SCN4AP35499 AC244098.2-201ENST00000422068 99 ntBASIC2.41□□□□□ -2.02
SCN4AP35499 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.41□□□□□ -2.02
SCN4AP35499 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC2.41□□□□□ -2.02
SCN4AP35499 AC004865.1-201ENST00000442276 1003 ntBASIC2.41□□□□□ -2.02
SCN4AP35499 AL163540.1-201ENST00000485382 386 ntBASIC2.41□□□□□ -2.02
SCN4AP35499 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.41□□□□□ -2.02
SCN4AP35499 MTND2P26-201ENST00000528255 1029 ntBASIC2.41□□□□□ -2.02
SCN4AP35499 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC2.41□□□□□ -2.02
SCN4AP35499 AC092470.1-201ENST00000546187 132 ntBASIC2.41□□□□□ -2.02
SCN4AP35499 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.41□□□□□ -2.02
SCN4AP35499 CYB5AP5-201ENST00000549779 389 ntBASIC2.41□□□□□ -2.02
SCN4AP35499 ZNF971P-201ENST00000562068 1249 ntBASIC2.41□□□□□ -2.02
SCN4AP35499 MIR3908-201ENST00000579798 126 ntBASIC2.41□□□□□ -2.02
SCN4AP35499 RNU6-1192P-201ENST00000612197 107 ntBASIC2.41□□□□□ -2.02
SCN4AP35499 RNU6-489P-201ENST00000618289 107 ntBASIC2.41□□□□□ -2.02
SCN4AP35499 AC006249.1-201ENST00000621223 471 ntBASIC2.41□□□□□ -2.02
SCN4AP35499 BX649567.1-201ENST00000642071 1134 ntBASIC2.41□□□□□ -2.02
SCN4AP35499 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.4□□□□□ -2.02
SCN4AP35499 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC2.4□□□□□ -2.02
SCN4AP35499 AC012321.1-201ENST00000561622 1588 ntBASIC2.4□□□□□ -2.02
SCN4AP35499 RNA5SP189-201ENST00000364920 115 ntBASIC2.4□□□□□ -2.02
SCN4AP35499 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.02
SCN4AP35499 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC2.4□□□□□ -2.02
SCN4AP35499 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.4□□□□□ -2.02
SCN4AP35499 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.4□□□□□ -2.02
SCN4AP35499 RPL23AP58-201ENST00000440453 469 ntBASIC2.4□□□□□ -2.02
SCN4AP35499 AL591719.1-201ENST00000444669 744 ntBASIC2.4□□□□□ -2.02
SCN4AP35499 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.02
SCN4AP35499 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.4□□□□□ -2.02
SCN4AP35499 AC118282.2-201ENST00000508739 374 ntBASIC2.4□□□□□ -2.02
SCN4AP35499 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC2.4□□□□□ -2.02
SCN4AP35499 MTND2P7-201ENST00000521337 640 ntBASIC2.4□□□□□ -2.02
SCN4AP35499 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.4□□□□□ -2.02
SCN4AP35499 MTATP6P2-201ENST00000603319 678 ntBASIC2.4□□□□□ -2.02
SCN4AP35499 AC092954.1-201ENST00000609121 445 ntBASIC2.4□□□□□ -2.02
SCN4AP35499 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.4□□□□□ -2.02
SCN4AP35499 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
SCN4AP35499 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
SCN4AP35499 RNU6-353P-201ENST00000364266 108 ntBASIC2.4□□□□□ -2.03
SCN4AP35499 RNU1-138P-201ENST00000384093 164 ntBASIC2.4□□□□□ -2.03
SCN4AP35499 MIR9-3-201ENST00000385084 90 ntBASIC2.4□□□□□ -2.03
SCN4AP35499 AC019129.1-201ENST00000403786 261 ntBASIC2.4□□□□□ -2.03
SCN4AP35499 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC2.4□□□□□ -2.03
SCN4AP35499 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.4□□□□□ -2.03
SCN4AP35499 AC013262.1-201ENST00000426710 252 ntBASIC2.4□□□□□ -2.03
SCN4AP35499 FO393414.1-201ENST00000428697 1184 ntBASIC2.4□□□□□ -2.03
SCN4AP35499 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC2.4□□□□□ -2.03
SCN4AP35499 AL590762.3-201ENST00000436372 640 ntBASIC2.4□□□□□ -2.03
SCN4AP35499 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.4□□□□□ -2.03
SCN4AP35499 AL138799.3-201ENST00000438968 350 ntBASIC2.4□□□□□ -2.03
SCN4AP35499 RPS15AP7-201ENST00000439294 405 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms