Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.64□□□□□ -1.99
RORAP35398 AC004486.1-201ENST00000546846 233 ntBASIC2.64□□□□□ -1.99
RORAP35398 AC103810.1-201ENST00000579873 453 ntBASIC2.64□□□□□ -1.99
RORAP35398 MIR3670-2-201ENST00000582974 65 ntBASIC2.64□□□□□ -1.99
RORAP35398 MIR3670-1-201ENST00000584160 65 ntBASIC2.64□□□□□ -1.99
RORAP35398 MIR3670-3-201ENST00000584855 65 ntBASIC2.64□□□□□ -1.99
RORAP35398 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.64□□□□□ -1.99
RORAP35398 MIR3670-4-201ENST00000612260 65 ntBASIC2.64□□□□□ -1.99
RORAP35398 AL020991.1-201ENST00000612314 373 ntBASIC2.64□□□□□ -1.99
RORAP35398 AC004852.3-201ENST00000614131 326 ntBASIC2.64□□□□□ -1.99
RORAP35398 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
RORAP35398 AC009269.6-201ENST00000621778 588 ntBASIC2.64□□□□□ -1.99
RORAP35398 AC005858.4-201ENST00000623191 700 ntBASIC2.64□□□□□ -1.99
RORAP35398 AC079228.1-201ENST00000624774 1049 ntBASIC2.64□□□□□ -1.99
RORAP35398 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.64□□□□□ -1.99
RORAP35398 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
RORAP35398 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
RORAP35398 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
RORAP35398 AL161431.1-201ENST00000618966 4205 ntBASIC2.64□□□□□ -1.99
RORAP35398 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
RORAP35398 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
RORAP35398 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.63□□□□□ -1.99
RORAP35398 AL356473.1-201ENST00000406203 1408 ntBASIC2.63□□□□□ -1.99
RORAP35398 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
RORAP35398 FRG1BP-201ENST00000278882 761 ntBASIC2.63□□□□□ -1.99
RORAP35398 RPL9P7-201ENST00000330965 580 ntBASIC2.63□□□□□ -1.99
RORAP35398 RNU1-112P-201ENST00000364401 164 ntBASIC2.63□□□□□ -1.99
RORAP35398 HMGB1P17-201ENST00000403495 628 ntBASIC2.63□□□□□ -1.99
RORAP35398 MIR1290-201ENST00000408735 78 ntBASIC2.63□□□□□ -1.99
RORAP35398 RNA5SP21-201ENST00000410917 96 ntBASIC2.63□□□□□ -1.99
RORAP35398 HMGN2P35-201ENST00000412164 270 ntBASIC2.63□□□□□ -1.99
RORAP35398 AL451074.5-201ENST00000415894 435 ntBASIC2.63□□□□□ -1.99
RORAP35398 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.63□□□□□ -1.99
RORAP35398 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.63□□□□□ -1.99
RORAP35398 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.63□□□□□ -1.99
RORAP35398 AL513043.1-201ENST00000439124 535 ntBASIC2.63□□□□□ -1.99
RORAP35398 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.63□□□□□ -1.99
RORAP35398 AL592447.1-201ENST00000447592 540 ntBASIC2.63□□□□□ -1.99
RORAP35398 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.63□□□□□ -1.99
RORAP35398 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC2.63□□□□□ -1.99
RORAP35398 AL049714.1-201ENST00000466686 347 ntBASIC2.63□□□□□ -1.99
RORAP35398 OR5BM1P-201ENST00000512021 366 ntBASIC2.63□□□□□ -1.99
RORAP35398 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.63□□□□□ -1.99
RORAP35398 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.63□□□□□ -1.99
RORAP35398 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.63□□□□□ -1.99
RORAP35398 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.63□□□□□ -1.99
RORAP35398 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC2.63□□□□□ -1.99
RORAP35398 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.63□□□□□ -1.99
RORAP35398 HMGB1P14-201ENST00000557424 591 ntBASIC2.63□□□□□ -1.99
RORAP35398 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.63□□□□□ -1.99
RORAP35398 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.63□□□□□ -1.99
RORAP35398 AC083760.1-201ENST00000589621 670 ntBASIC2.63□□□□□ -1.99
RORAP35398 MTND3P19-201ENST00000603825 345 ntBASIC2.63□□□□□ -1.99
RORAP35398 AL158050.2-201ENST00000605336 568 ntBASIC2.63□□□□□ -1.99
RORAP35398 AL390208.1-201ENST00000605885 644 ntBASIC2.63□□□□□ -1.99
RORAP35398 AL121652.1-201ENST00000608851 448 ntBASIC2.63□□□□□ -1.99
RORAP35398 AP000254.1-201ENST00000609934 520 ntBASIC2.63□□□□□ -1.99
RORAP35398 DUXAP10-204ENST00000612052 616 ntBASIC2.63□□□□□ -1.99
RORAP35398 AL355493.4-201ENST00000618530 292 ntBASIC2.63□□□□□ -1.99
RORAP35398 AL596245.1-201ENST00000618994 362 ntBASIC2.63□□□□□ -1.99
RORAP35398 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
RORAP35398 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
RORAP35398 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.63□□□□□ -1.99
RORAP35398 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
RORAP35398 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
RORAP35398 AL136360.1-201ENST00000503377 1900 ntBASIC2.62□□□□□ -1.99
RORAP35398 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.62□□□□□ -1.99
RORAP35398 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
RORAP35398 MIR26A1-201ENST00000362205 77 ntBASIC2.62□□□□□ -1.99
RORAP35398 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
RORAP35398 RPS4XP8-201ENST00000402039 771 ntBASIC2.62□□□□□ -1.99
RORAP35398 TPMTP2-201ENST00000414372 726 ntBASIC2.62□□□□□ -1.99
RORAP35398 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC2.62□□□□□ -1.99
RORAP35398 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC2.62□□□□□ -1.99
RORAP35398 AC092427.1-202ENST00000430569 476 ntBASIC2.62□□□□□ -1.99
RORAP35398 RPL36AP6-201ENST00000435770 321 ntBASIC2.62□□□□□ -1.99
RORAP35398 AC129850.1-201ENST00000436203 508 ntBASIC2.62□□□□□ -1.99
RORAP35398 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.62□□□□□ -1.99
RORAP35398 OR10R1P-201ENST00000441524 1141 ntBASIC2.62□□□□□ -1.99
RORAP35398 MTND4LP3-201ENST00000468320 276 ntBASIC2.62□□□□□ -1.99
RORAP35398 RN7SL432P-201ENST00000484057 298 ntBASIC2.62□□□□□ -1.99
RORAP35398 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.62□□□□□ -1.99
RORAP35398 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.62□□□□□ -1.99
RORAP35398 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.62□□□□□ -1.99
RORAP35398 ELOCP31-201ENST00000540463 467 ntBASIC2.62□□□□□ -1.99
RORAP35398 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC2.62□□□□□ -1.99
RORAP35398 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
RORAP35398 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.62□□□□□ -1.99
RORAP35398 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.62□□□□□ -1.99
RORAP35398 MIR3921-201ENST00000577308 85 ntBASIC2.62□□□□□ -1.99
RORAP35398 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.62□□□□□ -1.99
RORAP35398 BNIP3P27-201ENST00000599991 412 ntBASIC2.62□□□□□ -1.99
RORAP35398 SNHG22-203ENST00000617833 660 ntBASIC2.62□□□□□ -1.99
RORAP35398 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
RORAP35398 AC092593.1-201ENST00000515413 1815 ntBASIC2.62□□□□□ -1.99
RORAP35398 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.62□□□□□ -1.99
RORAP35398 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.62□□□□□ -1.99
RORAP35398 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
RORAP35398 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
RORAP35398 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms