Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 RPL21P28-201ENST00000401418 483 ntBASIC2.66□□□□□ -1.98
SHMT2P34897 AL592114.1-201ENST00000403842 483 ntBASIC2.66□□□□□ -1.98
SHMT2P34897 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.66□□□□□ -1.98
SHMT2P34897 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.66□□□□□ -1.98
SHMT2P34897 AC084290.1-201ENST00000434995 374 ntBASIC2.66□□□□□ -1.98
SHMT2P34897 COX7BP2-201ENST00000437976 242 ntBASIC2.66□□□□□ -1.98
SHMT2P34897 MTND5P14-201ENST00000441481 1267 ntBASIC2.66□□□□□ -1.98
SHMT2P34897 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.66□□□□□ -1.98
SHMT2P34897 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.66□□□□□ -1.98
SHMT2P34897 USP9YP25-201ENST00000457708 443 ntBASIC2.66□□□□□ -1.98
SHMT2P34897 RNA5SP310-201ENST00000459084 116 ntBASIC2.66□□□□□ -1.98
SHMT2P34897 AP001486.1-201ENST00000463339 476 ntBASIC2.66□□□□□ -1.98
SHMT2P34897 RPL21P39-201ENST00000463605 483 ntBASIC2.66□□□□□ -1.98
SHMT2P34897 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.66□□□□□ -1.98
SHMT2P34897 RPL21P93-201ENST00000480465 489 ntBASIC2.66□□□□□ -1.98
SHMT2P34897 AC233702.1-201ENST00000482905 502 ntBASIC2.66□□□□□ -1.98
SHMT2P34897 AC087190.1-201ENST00000484462 480 ntBASIC2.66□□□□□ -1.98
SHMT2P34897 AC108729.1-201ENST00000487812 947 ntBASIC2.66□□□□□ -1.98
SHMT2P34897 AC093591.1-201ENST00000491435 481 ntBASIC2.66□□□□□ -1.98
SHMT2P34897 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC2.66□□□□□ -1.98
SHMT2P34897 RPL21P16-201ENST00000495531 483 ntBASIC2.66□□□□□ -1.98
SHMT2P34897 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.66□□□□□ -1.98
SHMT2P34897 VN1R104P-201ENST00000505115 1009 ntBASIC2.66□□□□□ -1.98
SHMT2P34897 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.66□□□□□ -1.98
SHMT2P34897 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.66□□□□□ -1.98
SHMT2P34897 AC022483.1-201ENST00000514020 567 ntBASIC2.66□□□□□ -1.98
SHMT2P34897 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.66□□□□□ -1.98
SHMT2P34897 RNU6-714P-201ENST00000516963 103 ntBASIC2.66□□□□□ -1.98
SHMT2P34897 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.66□□□□□ -1.98
SHMT2P34897 OR6C7P-201ENST00000547875 934 ntBASIC2.66□□□□□ -1.98
SHMT2P34897 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.66□□□□□ -1.98
SHMT2P34897 DNAJC8P1-201ENST00000554535 372 ntBASIC2.66□□□□□ -1.98
SHMT2P34897 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.66□□□□□ -1.98
SHMT2P34897 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.66□□□□□ -1.98
SHMT2P34897 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC2.66□□□□□ -1.98
SHMT2P34897 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.66□□□□□ -1.98
SHMT2P34897 AL353997.4-201ENST00000586196 166 ntBASIC2.66□□□□□ -1.98
SHMT2P34897 BBIP1P1-201ENST00000602999 279 ntBASIC2.66□□□□□ -1.98
SHMT2P34897 ATP1B3P1-201ENST00000605365 821 ntBASIC2.66□□□□□ -1.98
SHMT2P34897 AC007619.2-201ENST00000605743 379 ntBASIC2.66□□□□□ -1.98
SHMT2P34897 AC006270.3-201ENST00000605967 1036 ntBASIC2.66□□□□□ -1.98
SHMT2P34897 AC005046.1-201ENST00000608515 625 ntBASIC2.66□□□□□ -1.98
SHMT2P34897 AL590099.1-201ENST00000615276 138 ntBASIC2.66□□□□□ -1.98
SHMT2P34897 AL391262.2-201ENST00000622466 494 ntBASIC2.66□□□□□ -1.98
SHMT2P34897 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.65□□□□□ -1.98
SHMT2P34897 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.65□□□□□ -1.99
SHMT2P34897 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
SHMT2P34897 SNORA14A-201ENST00000364773 135 ntBASIC2.65□□□□□ -1.99
SHMT2P34897 AL512633.1-201ENST00000399931 655 ntBASIC2.65□□□□□ -1.99
SHMT2P34897 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.65□□□□□ -1.99
SHMT2P34897 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.65□□□□□ -1.99
SHMT2P34897 THAP5P1-201ENST00000439089 262 ntBASIC2.65□□□□□ -1.99
SHMT2P34897 RPL26P6-201ENST00000440913 438 ntBASIC2.65□□□□□ -1.99
SHMT2P34897 MTND1P31-201ENST00000449206 961 ntBASIC2.65□□□□□ -1.99
SHMT2P34897 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.65□□□□□ -1.99
SHMT2P34897 USP9YP10-201ENST00000454868 628 ntBASIC2.65□□□□□ -1.99
SHMT2P34897 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.65□□□□□ -1.99
SHMT2P34897 snoU13.8-201ENST00000458890 104 ntBASIC2.65□□□□□ -1.99
SHMT2P34897 AL049873.1-201ENST00000480540 376 ntBASIC2.65□□□□□ -1.99
SHMT2P34897 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.65□□□□□ -1.99
SHMT2P34897 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.65□□□□□ -1.99
SHMT2P34897 RNA5SP356-201ENST00000515972 94 ntBASIC2.65□□□□□ -1.99
SHMT2P34897 SNORA31.1-201ENST00000515993 133 ntBASIC2.65□□□□□ -1.99
SHMT2P34897 SNORA31.5-201ENST00000516190 133 ntBASIC2.65□□□□□ -1.99
SHMT2P34897 SNORA31.21-201ENST00000517180 77 ntBASIC2.65□□□□□ -1.99
SHMT2P34897 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.65□□□□□ -1.99
SHMT2P34897 ERHP1-201ENST00000523006 310 ntBASIC2.65□□□□□ -1.99
SHMT2P34897 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.65□□□□□ -1.99
SHMT2P34897 AC079600.2-201ENST00000550076 130 ntBASIC2.65□□□□□ -1.99
SHMT2P34897 NBEAP1-201ENST00000554452 979 ntBASIC2.65□□□□□ -1.99
SHMT2P34897 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.65□□□□□ -1.99
SHMT2P34897 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.65□□□□□ -1.99
SHMT2P34897 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.65□□□□□ -1.99
SHMT2P34897 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.65□□□□□ -1.99
SHMT2P34897 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.65□□□□□ -1.99
SHMT2P34897 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.65□□□□□ -1.99
SHMT2P34897 BNIP3P40-201ENST00000596017 556 ntBASIC2.65□□□□□ -1.99
SHMT2P34897 AC091057.2-201ENST00000602594 792 ntBASIC2.65□□□□□ -1.99
SHMT2P34897 AC002550.2-201ENST00000621246 394 ntBASIC2.65□□□□□ -1.99
SHMT2P34897 AC090897.3-201ENST00000636973 1157 ntBASIC2.65□□□□□ -1.99
SHMT2P34897 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC2.65□□□□□ -1.99
SHMT2P34897 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
SHMT2P34897 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.65□□□□□ -1.99
SHMT2P34897 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
SHMT2P34897 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
SHMT2P34897 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.99
SHMT2P34897 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
SHMT2P34897 RNU6-1027P-201ENST00000383998 107 ntBASIC2.64□□□□□ -1.99
SHMT2P34897 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
SHMT2P34897 AL360182.1-201ENST00000397433 468 ntBASIC2.64□□□□□ -1.99
SHMT2P34897 AL592148.1-201ENST00000413568 445 ntBASIC2.64□□□□□ -1.99
SHMT2P34897 CCDC58P2-201ENST00000417131 366 ntBASIC2.64□□□□□ -1.99
SHMT2P34897 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC2.64□□□□□ -1.99
SHMT2P34897 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC2.64□□□□□ -1.99
SHMT2P34897 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.64□□□□□ -1.99
SHMT2P34897 ZYG11AP1-201ENST00000430329 837 ntBASIC2.64□□□□□ -1.99
SHMT2P34897 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.64□□□□□ -1.99
SHMT2P34897 NDUFB4P6-201ENST00000436819 366 ntBASIC2.64□□□□□ -1.99
SHMT2P34897 FGF7P5-201ENST00000441829 291 ntBASIC2.64□□□□□ -1.99
SHMT2P34897 AL121871.1-201ENST00000443413 436 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 157.1 ms