Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HOXC13P31276 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
HOXC13P31276 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
HOXC13P31276 AP000776.1-201ENST00000530032 1663 ntBASIC3.55□□□□□ -1.84
HOXC13P31276 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HOXC13P31276 AC099654.7-201ENST00000635788 2127 ntBASIC3.55□□□□□ -1.84
HOXC13P31276 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.55□□□□□ -1.84
HOXC13P31276 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
HOXC13P31276 RNU6-867P-201ENST00000364956 107 ntBASIC3.55□□□□□ -1.84
HOXC13P31276 RPL30P2-201ENST00000414021 291 ntBASIC3.55□□□□□ -1.84
HOXC13P31276 AL008987.1-201ENST00000415528 237 ntBASIC3.55□□□□□ -1.84
HOXC13P31276 MTND1P23-201ENST00000416931 372 ntBASIC3.55□□□□□ -1.84
HOXC13P31276 HMGB1P49-201ENST00000418882 569 ntBASIC3.55□□□□□ -1.84
HOXC13P31276 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.55□□□□□ -1.84
HOXC13P31276 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.55□□□□□ -1.84
HOXC13P31276 C8orf59P1-201ENST00000429930 303 ntBASIC3.55□□□□□ -1.84
HOXC13P31276 AL353705.1-201ENST00000433468 480 ntBASIC3.55□□□□□ -1.84
HOXC13P31276 RPS25P9-201ENST00000435591 252 ntBASIC3.55□□□□□ -1.84
HOXC13P31276 MTND3P1-201ENST00000441336 220 ntBASIC3.55□□□□□ -1.84
HOXC13P31276 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.55□□□□□ -1.84
HOXC13P31276 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.55□□□□□ -1.84
HOXC13P31276 BX322784.1-201ENST00000455793 1077 ntBASIC3.55□□□□□ -1.84
HOXC13P31276 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.55□□□□□ -1.84
HOXC13P31276 AL359385.1-201ENST00000456509 365 ntBASIC3.55□□□□□ -1.84
HOXC13P31276 AL031183.1-201ENST00000457667 207 ntBASIC3.55□□□□□ -1.84
HOXC13P31276 AL049714.1-201ENST00000466686 347 ntBASIC3.55□□□□□ -1.84
HOXC13P31276 AC021205.2-201ENST00000480069 347 ntBASIC3.55□□□□□ -1.84
HOXC13P31276 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.55□□□□□ -1.84
HOXC13P31276 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.55□□□□□ -1.84
HOXC13P31276 HMGB1P14-201ENST00000557424 591 ntBASIC3.55□□□□□ -1.84
HOXC13P31276 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.55□□□□□ -1.84
HOXC13P31276 AC011451.2-201ENST00000604303 598 ntBASIC3.55□□□□□ -1.84
HOXC13P31276 AL353621.2-201ENST00000605340 133 ntBASIC3.55□□□□□ -1.84
HOXC13P31276 AC016727.1-205ENST00000605437 569 ntBASIC3.55□□□□□ -1.84
HOXC13P31276 AL031775.1-201ENST00000607014 887 ntBASIC3.55□□□□□ -1.84
HOXC13P31276 AP000254.1-201ENST00000609934 520 ntBASIC3.55□□□□□ -1.84
HOXC13P31276 AC109347.2-201ENST00000610220 349 ntBASIC3.55□□□□□ -1.84
HOXC13P31276 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HOXC13P31276 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.55□□□□□ -1.84
HOXC13P31276 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
HOXC13P31276 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.55□□□□□ -1.84
HOXC13P31276 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HOXC13P31276 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HOXC13P31276 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HOXC13P31276 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
HOXC13P31276 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
HOXC13P31276 MTND5P29-201ENST00000458676 1807 ntBASIC3.54□□□□□ -1.84
HOXC13P31276 RNU6-694P-201ENST00000364071 147 ntBASIC3.54□□□□□ -1.84
HOXC13P31276 RNU6-517P-201ENST00000384362 110 ntBASIC3.54□□□□□ -1.84
HOXC13P31276 MTCYBP38-201ENST00000417160 1123 ntBASIC3.54□□□□□ -1.84
HOXC13P31276 ELOCP9-201ENST00000418624 239 ntBASIC3.54□□□□□ -1.84
HOXC13P31276 ZYG11AP1-201ENST00000430329 837 ntBASIC3.54□□□□□ -1.84
HOXC13P31276 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.54□□□□□ -1.84
HOXC13P31276 AC024082.2-201ENST00000434771 238 ntBASIC3.54□□□□□ -1.84
HOXC13P31276 AL008629.1-201ENST00000438615 184 ntBASIC3.54□□□□□ -1.84
HOXC13P31276 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.54□□□□□ -1.84
HOXC13P31276 AL360221.1-201ENST00000445989 335 ntBASIC3.54□□□□□ -1.84
HOXC13P31276 AC234775.1-201ENST00000454247 670 ntBASIC3.54□□□□□ -1.84
HOXC13P31276 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.54□□□□□ -1.84
HOXC13P31276 RPS29P12-201ENST00000460178 152 ntBASIC3.54□□□□□ -1.84
HOXC13P31276 MTND3P7-201ENST00000474435 343 ntBASIC3.54□□□□□ -1.84
HOXC13P31276 AC020893.1-201ENST00000502452 580 ntBASIC3.54□□□□□ -1.84
HOXC13P31276 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.54□□□□□ -1.84
HOXC13P31276 AC021678.1-201ENST00000505195 936 ntBASIC3.54□□□□□ -1.84
HOXC13P31276 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.54□□□□□ -1.84
HOXC13P31276 SNORA70.19-201ENST00000516717 90 ntBASIC3.54□□□□□ -1.84
HOXC13P31276 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.54□□□□□ -1.84
HOXC13P31276 OR6C7P-201ENST00000547875 934 ntBASIC3.54□□□□□ -1.84
HOXC13P31276 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.54□□□□□ -1.84
HOXC13P31276 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.54□□□□□ -1.84
HOXC13P31276 AC008015.1-201ENST00000555505 465 ntBASIC3.54□□□□□ -1.84
HOXC13P31276 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.54□□□□□ -1.84
HOXC13P31276 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.54□□□□□ -1.84
HOXC13P31276 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.54□□□□□ -1.84
HOXC13P31276 AC068135.2-201ENST00000569293 1028 ntBASIC3.54□□□□□ -1.84
HOXC13P31276 AL451007.1-201ENST00000595491 289 ntBASIC3.54□□□□□ -1.84
HOXC13P31276 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.54□□□□□ -1.84
HOXC13P31276 DUXAP4-201ENST00000603046 613 ntBASIC3.54□□□□□ -1.84
HOXC13P31276 AC006557.5-201ENST00000603126 811 ntBASIC3.54□□□□□ -1.84
HOXC13P31276 AC135507.2-201ENST00000612443 309 ntBASIC3.54□□□□□ -1.84
HOXC13P31276 AC099842.1-201ENST00000619919 596 ntBASIC3.54□□□□□ -1.84
HOXC13P31276 AL160394.1-201ENST00000624765 724 ntBASIC3.54□□□□□ -1.84
HOXC13P31276 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.54□□□□□ -1.84
HOXC13P31276 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
HOXC13P31276 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.54□□□□□ -1.84
HOXC13P31276 AC009812.4-201ENST00000569134 1805 ntBASIC3.54□□□□□ -1.84
HOXC13P31276 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.53□□□□□ -1.84
HOXC13P31276 AC005832.2-201ENST00000538921 1430 ntBASIC3.53□□□□□ -1.84
HOXC13P31276 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
HOXC13P31276 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HOXC13P31276 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HOXC13P31276 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HOXC13P31276 Y_RNA.510-201ENST00000384511 114 ntBASIC3.53□□□□□ -1.84
HOXC13P31276 U3.26-201ENST00000391236 204 ntBASIC3.53□□□□□ -1.84
HOXC13P31276 UBA52P6-201ENST00000399822 382 ntBASIC3.53□□□□□ -1.84
HOXC13P31276 AL021407.1-201ENST00000404531 386 ntBASIC3.53□□□□□ -1.84
HOXC13P31276 RAP1BP1-201ENST00000412709 553 ntBASIC3.53□□□□□ -1.84
HOXC13P31276 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.53□□□□□ -1.84
HOXC13P31276 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HOXC13P31276 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms