Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 RNU6-1197P-201ENST00000391183 107 ntBASIC3.02□□□□□ -1.93
PTPN4P29074 AL590004.2-201ENST00000404787 371 ntBASIC3.02□□□□□ -1.93
PTPN4P29074 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.02□□□□□ -1.93
PTPN4P29074 AL451074.5-201ENST00000415894 435 ntBASIC3.02□□□□□ -1.93
PTPN4P29074 COTL1P1-201ENST00000422309 375 ntBASIC3.02□□□□□ -1.93
PTPN4P29074 ZYG11AP1-201ENST00000430329 837 ntBASIC3.02□□□□□ -1.93
PTPN4P29074 MTND1P32-201ENST00000433043 938 ntBASIC3.02□□□□□ -1.93
PTPN4P29074 RPS29P6-201ENST00000438196 145 ntBASIC3.02□□□□□ -1.93
PTPN4P29074 MTND5P14-201ENST00000441481 1267 ntBASIC3.02□□□□□ -1.93
PTPN4P29074 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.02□□□□□ -1.93
PTPN4P29074 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.02□□□□□ -1.93
PTPN4P29074 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.02□□□□□ -1.93
PTPN4P29074 RPS26P21-201ENST00000475397 348 ntBASIC3.02□□□□□ -1.93
PTPN4P29074 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.02□□□□□ -1.93
PTPN4P29074 AC112673.1-201ENST00000513168 575 ntBASIC3.02□□□□□ -1.93
PTPN4P29074 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.02□□□□□ -1.93
PTPN4P29074 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.02□□□□□ -1.93
PTPN4P29074 RNU6-528P-201ENST00000516926 100 ntBASIC3.02□□□□□ -1.93
PTPN4P29074 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.02□□□□□ -1.93
PTPN4P29074 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC3.02□□□□□ -1.93
PTPN4P29074 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.02□□□□□ -1.93
PTPN4P29074 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.02□□□□□ -1.93
PTPN4P29074 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.02□□□□□ -1.93
PTPN4P29074 SETP2-201ENST00000553886 926 ntBASIC3.02□□□□□ -1.93
PTPN4P29074 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.02□□□□□ -1.93
PTPN4P29074 MTCO3P13-201ENST00000577757 781 ntBASIC3.02□□□□□ -1.93
PTPN4P29074 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.02□□□□□ -1.93
PTPN4P29074 AC023043.3-201ENST00000593113 385 ntBASIC3.02□□□□□ -1.93
PTPN4P29074 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.02□□□□□ -1.93
PTPN4P29074 AL596327.1-201ENST00000603629 213 ntBASIC3.02□□□□□ -1.93
PTPN4P29074 AL137843.1-201ENST00000605078 385 ntBASIC3.02□□□□□ -1.93
PTPN4P29074 uc_338.25-201ENST00000613756 156 ntBASIC3.02□□□□□ -1.93
PTPN4P29074 AC027309.3-201ENST00000623419 351 ntBASIC3.02□□□□□ -1.93
PTPN4P29074 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.02□□□□□ -1.93
PTPN4P29074 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.02□□□□□ -1.93
PTPN4P29074 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
PTPN4P29074 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.01□□□□□ -1.93
PTPN4P29074 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
PTPN4P29074 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
PTPN4P29074 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.01□□□□□ -1.93
PTPN4P29074 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
PTPN4P29074 RNU6-462P-201ENST00000362659 105 ntBASIC3.01□□□□□ -1.93
PTPN4P29074 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.01□□□□□ -1.93
PTPN4P29074 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.01□□□□□ -1.93
PTPN4P29074 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.01□□□□□ -1.93
PTPN4P29074 MTCO2P21-201ENST00000419780 677 ntBASIC3.01□□□□□ -1.93
PTPN4P29074 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.01□□□□□ -1.93
PTPN4P29074 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.01□□□□□ -1.93
PTPN4P29074 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.01□□□□□ -1.93
PTPN4P29074 AC108734.1-201ENST00000439549 399 ntBASIC3.01□□□□□ -1.93
PTPN4P29074 AL591719.1-201ENST00000444669 744 ntBASIC3.01□□□□□ -1.93
PTPN4P29074 AC002381.1-201ENST00000447049 280 ntBASIC3.01□□□□□ -1.93
PTPN4P29074 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.01□□□□□ -1.93
PTPN4P29074 ELOCP23-201ENST00000452014 332 ntBASIC3.01□□□□□ -1.93
PTPN4P29074 BX322784.1-201ENST00000455793 1077 ntBASIC3.01□□□□□ -1.93
PTPN4P29074 MEMO1P3-201ENST00000459811 302 ntBASIC3.01□□□□□ -1.93
PTPN4P29074 RPL23AP11-201ENST00000475260 469 ntBASIC3.01□□□□□ -1.93
PTPN4P29074 RN7SL20P-201ENST00000488827 297 ntBASIC3.01□□□□□ -1.93
PTPN4P29074 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.01□□□□□ -1.93
PTPN4P29074 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.01□□□□□ -1.93
PTPN4P29074 RNU6-714P-201ENST00000516963 103 ntBASIC3.01□□□□□ -1.93
PTPN4P29074 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.01□□□□□ -1.93
PTPN4P29074 AC090136.1-201ENST00000520009 240 ntBASIC3.01□□□□□ -1.93
PTPN4P29074 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.01□□□□□ -1.93
PTPN4P29074 PSMA2P1-201ENST00000526365 646 ntBASIC3.01□□□□□ -1.93
PTPN4P29074 AC023538.1-201ENST00000534576 736 ntBASIC3.01□□□□□ -1.93
PTPN4P29074 AC022080.3-201ENST00000544433 482 ntBASIC3.01□□□□□ -1.93
PTPN4P29074 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.01□□□□□ -1.93
PTPN4P29074 HMGB1P14-201ENST00000557424 591 ntBASIC3.01□□□□□ -1.93
PTPN4P29074 MIR2682-201ENST00000580305 110 ntBASIC3.01□□□□□ -1.93
PTPN4P29074 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.01□□□□□ -1.93
PTPN4P29074 HSPE1P7-201ENST00000604681 321 ntBASIC3.01□□□□□ -1.93
PTPN4P29074 AC090186.1-201ENST00000605991 572 ntBASIC3.01□□□□□ -1.93
PTPN4P29074 AL627309.6-201ENST00000606857 840 ntBASIC3.01□□□□□ -1.93
PTPN4P29074 TUSC7.1-201ENST00000610969 165 ntBASIC3.01□□□□□ -1.93
PTPN4P29074 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.01□□□□□ -1.93
PTPN4P29074 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.01□□□□□ -1.93
PTPN4P29074 AC090617.7-201ENST00000623952 126 ntBASIC3.01□□□□□ -1.93
PTPN4P29074 AC006386.2-201ENST00000624491 75 ntBASIC3.01□□□□□ -1.93
PTPN4P29074 AC012005.1-201ENST00000624575 75 ntBASIC3.01□□□□□ -1.93
PTPN4P29074 AP000676.4-201ENST00000624659 623 ntBASIC3.01□□□□□ -1.93
PTPN4P29074 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
PTPN4P29074 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
PTPN4P29074 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
PTPN4P29074 AL355596.1-201ENST00000565399 3996 ntBASIC3.01□□□□□ -1.93
PTPN4P29074 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
PTPN4P29074 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
PTPN4P29074 U8.9-201ENST00000365667 134 ntBASIC3□□□□□ -1.93
PTPN4P29074 SNORA7.4-201ENST00000384249 137 ntBASIC3□□□□□ -1.93
PTPN4P29074 AC110754.1-201ENST00000399740 601 ntBASIC3□□□□□ -1.93
PTPN4P29074 MTND1P21-201ENST00000412991 285 ntBASIC3□□□□□ -1.93
PTPN4P29074 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3□□□□□ -1.93
PTPN4P29074 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC3□□□□□ -1.93
PTPN4P29074 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3□□□□□ -1.93
PTPN4P29074 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC3□□□□□ -1.93
PTPN4P29074 SAR1AP4-201ENST00000429225 591 ntBASIC3□□□□□ -1.93
PTPN4P29074 MTCYBP45-201ENST00000435243 565 ntBASIC3□□□□□ -1.93
PTPN4P29074 RPL39P40-201ENST00000445481 146 ntBASIC3□□□□□ -1.93
PTPN4P29074 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3□□□□□ -1.93
PTPN4P29074 RPL30P5-201ENST00000494923 336 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms