Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 AP1S2P1-201ENST00000457344 379 ntBASIC2.6□□□□□ -1.99
NCK1P16333 AC008571.1-201ENST00000467232 300 ntBASIC2.6□□□□□ -1.99
NCK1P16333 WDR78-207ENST00000488333 613 ntTSL 3 BASIC2.6□□□□□ -1.99
NCK1P16333 CDC42P4-201ENST00000510507 563 ntBASIC2.6□□□□□ -1.99
NCK1P16333 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.6□□□□□ -1.99
NCK1P16333 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.6□□□□□ -1.99
NCK1P16333 RNU6-150P-201ENST00000516237 95 ntBASIC2.6□□□□□ -1.99
NCK1P16333 SNORA74D-201ENST00000516404 141 ntBASIC2.6□□□□□ -1.99
NCK1P16333 NRON-201ENST00000517270 370 ntBASIC2.6□□□□□ -1.99
NCK1P16333 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
NCK1P16333 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.6□□□□□ -1.99
NCK1P16333 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
NCK1P16333 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
NCK1P16333 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
NCK1P16333 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.6□□□□□ -1.99
NCK1P16333 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.6□□□□□ -1.99
NCK1P16333 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.6□□□□□ -1.99
NCK1P16333 AC069200.1-201ENST00000609511 323 ntBASIC2.6□□□□□ -1.99
NCK1P16333 AC107075.1-201ENST00000613695 314 ntBASIC2.6□□□□□ -1.99
NCK1P16333 AC004696.1-201ENST00000614345 607 ntBASIC2.6□□□□□ -1.99
NCK1P16333 MIR7975-201ENST00000619350 68 ntBASIC2.6□□□□□ -1.99
NCK1P16333 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.6□□□□□ -1.99
NCK1P16333 MTND4P9-201ENST00000507819 1346 ntBASIC2.6□□□□□ -1.99
NCK1P16333 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
NCK1P16333 AL138713.1-201ENST00000624026 2130 ntBASIC2.6□□□□□ -1.99
NCK1P16333 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.6□□□□□ -1.99
NCK1P16333 AC080100.1-201ENST00000624239 5356 ntBASIC2.6□□□□□ -1.99
NCK1P16333 AC092447.7-201ENST00000422212 1621 ntBASIC2.6□□□□□ -1.99
NCK1P16333 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.6□□□□□ -1.99
NCK1P16333 CR848007.1-201ENST00000442354 1699 ntBASIC2.6□□□□□ -1.99
NCK1P16333 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
NCK1P16333 Z82195.2-201ENST00000612348 18351 ntBASIC2.59□□□□□ -1.99
NCK1P16333 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -1.99
NCK1P16333 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
NCK1P16333 AC006378.2-201ENST00000623178 2476 ntBASIC2.59□□□□□ -1.99
NCK1P16333 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
NCK1P16333 MIR26A1-201ENST00000362205 77 ntBASIC2.59□□□□□ -1.99
NCK1P16333 RNA5SP387-201ENST00000364226 106 ntBASIC2.59□□□□□ -1.99
NCK1P16333 SNORA23-201ENST00000365128 182 ntBASIC2.59□□□□□ -1.99
NCK1P16333 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
NCK1P16333 Y_RNA.465-201ENST00000384293 102 ntBASIC2.59□□□□□ -1.99
NCK1P16333 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
NCK1P16333 U3.19-201ENST00000390893 196 ntBASIC2.59□□□□□ -1.99
NCK1P16333 RNA5SP354-201ENST00000391247 136 ntBASIC2.59□□□□□ -1.99
NCK1P16333 AL355143.1-201ENST00000407101 841 ntBASIC2.59□□□□□ -1.99
NCK1P16333 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.59□□□□□ -1.99
NCK1P16333 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
NCK1P16333 RNA5SP120-201ENST00000410900 112 ntBASIC2.59□□□□□ -1.99
NCK1P16333 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.59□□□□□ -1.99
NCK1P16333 AC099548.1-201ENST00000421443 426 ntBASIC2.59□□□□□ -1.99
NCK1P16333 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.59□□□□□ -1.99
NCK1P16333 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.59□□□□□ -1.99
NCK1P16333 AL049734.2-201ENST00000441066 616 ntBASIC2.59□□□□□ -1.99
NCK1P16333 ST13P20-201ENST00000447996 1065 ntBASIC2.59□□□□□ -1.99
NCK1P16333 AP000705.1-201ENST00000454567 350 ntBASIC2.59□□□□□ -1.99
NCK1P16333 MTND4LP3-201ENST00000468320 276 ntBASIC2.59□□□□□ -1.99
NCK1P16333 AC126182.1-201ENST00000478134 357 ntBASIC2.59□□□□□ -1.99
NCK1P16333 RPS27P26-201ENST00000494583 239 ntBASIC2.59□□□□□ -1.99
NCK1P16333 AC147055.4-201ENST00000504399 745 ntBASIC2.59□□□□□ -1.99
NCK1P16333 SEM1P1-201ENST00000506694 209 ntBASIC2.59□□□□□ -1.99
NCK1P16333 AC113155.1-201ENST00000511141 769 ntBASIC2.59□□□□□ -1.99
NCK1P16333 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.59□□□□□ -1.99
NCK1P16333 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.59□□□□□ -1.99
NCK1P16333 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.59□□□□□ -1.99
NCK1P16333 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.59□□□□□ -1.99
NCK1P16333 AC128657.1-201ENST00000549459 145 ntBASIC2.59□□□□□ -1.99
NCK1P16333 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.59□□□□□ -1.99
NCK1P16333 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.59□□□□□ -1.99
NCK1P16333 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.59□□□□□ -1.99
NCK1P16333 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.59□□□□□ -1.99
NCK1P16333 AC091057.2-201ENST00000602594 792 ntBASIC2.59□□□□□ -1.99
NCK1P16333 ELOCP35-201ENST00000604289 336 ntBASIC2.59□□□□□ -1.99
NCK1P16333 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC2.59□□□□□ -1.99
NCK1P16333 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.59□□□□□ -1.99
NCK1P16333 AC079597.1-201ENST00000624306 508 ntBASIC2.59□□□□□ -1.99
NCK1P16333 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
NCK1P16333 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -2
NCK1P16333 MTND5P1-201ENST00000445440 1375 ntBASIC2.59□□□□□ -2
NCK1P16333 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -2
NCK1P16333 AC026241.1-201ENST00000517873 2142 ntBASIC2.59□□□□□ -2
NCK1P16333 AC009902.3-201ENST00000606235 2172 ntBASIC2.59□□□□□ -2
NCK1P16333 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
NCK1P16333 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.58□□□□□ -2
NCK1P16333 RNU4-92P-201ENST00000363783 136 ntBASIC2.58□□□□□ -2
NCK1P16333 MIR592-201ENST00000384959 97 ntBASIC2.58□□□□□ -2
NCK1P16333 RNU6-1176P-201ENST00000390955 107 ntBASIC2.58□□□□□ -2
NCK1P16333 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.58□□□□□ -2
NCK1P16333 CCNG1P1-201ENST00000406783 885 ntBASIC2.58□□□□□ -2
NCK1P16333 RNU2-33P-201ENST00000410344 192 ntBASIC2.58□□□□□ -2
NCK1P16333 RNU6-516P-201ENST00000411381 104 ntBASIC2.58□□□□□ -2
NCK1P16333 AL513331.1-201ENST00000411908 397 ntBASIC2.58□□□□□ -2
NCK1P16333 AL358075.3-201ENST00000426289 226 ntBASIC2.58□□□□□ -2
NCK1P16333 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.58□□□□□ -2
NCK1P16333 AC022018.1-201ENST00000430685 241 ntBASIC2.58□□□□□ -2
NCK1P16333 ATP5F1P1-201ENST00000433775 569 ntBASIC2.58□□□□□ -2
NCK1P16333 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.58□□□□□ -2
NCK1P16333 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.58□□□□□ -2
NCK1P16333 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.58□□□□□ -2
NCK1P16333 PRDX3P3-201ENST00000447765 522 ntBASIC2.58□□□□□ -2
NCK1P16333 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms