Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.17□□□□□ -1.9
KRT3P12035 AP000676.3-201ENST00000623299 569 ntBASIC3.17□□□□□ -1.9
KRT3P12035 AL356266.1-201ENST00000623311 483 ntBASIC3.17□□□□□ -1.9
KRT3P12035 AC079416.3-201ENST00000624479 549 ntBASIC3.17□□□□□ -1.9
KRT3P12035 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
KRT3P12035 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.17□□□□□ -1.9
KRT3P12035 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
KRT3P12035 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.17□□□□□ -1.9
KRT3P12035 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
KRT3P12035 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRT3P12035 AL391994.1-201ENST00000254724 282 ntBASIC3.16□□□□□ -1.9
KRT3P12035 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.16□□□□□ -1.9
KRT3P12035 Y_RNA.169-201ENST00000363745 96 ntBASIC3.16□□□□□ -1.9
KRT3P12035 SNORA14A-201ENST00000364773 135 ntBASIC3.16□□□□□ -1.9
KRT3P12035 SNORA54-201ENST00000384281 123 ntBASIC3.16□□□□□ -1.9
KRT3P12035 RPL5P18-201ENST00000406671 891 ntBASIC3.16□□□□□ -1.9
KRT3P12035 RNA5SP38-201ENST00000410750 119 ntBASIC3.16□□□□□ -1.9
KRT3P12035 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.16□□□□□ -1.9
KRT3P12035 BMS1P22-201ENST00000414726 313 ntBASIC3.16□□□□□ -1.9
KRT3P12035 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC3.16□□□□□ -1.9
KRT3P12035 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.16□□□□□ -1.9
KRT3P12035 USP9YP36-201ENST00000424581 829 ntBASIC3.16□□□□□ -1.9
KRT3P12035 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.16□□□□□ -1.9
KRT3P12035 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.16□□□□□ -1.9
KRT3P12035 OR6K1P-201ENST00000456766 971 ntBASIC3.16□□□□□ -1.9
KRT3P12035 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.16□□□□□ -1.9
KRT3P12035 RPS3AP22-201ENST00000488297 769 ntBASIC3.16□□□□□ -1.9
KRT3P12035 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC3.16□□□□□ -1.9
KRT3P12035 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.16□□□□□ -1.9
KRT3P12035 ARL4AP2-201ENST00000507378 601 ntBASIC3.16□□□□□ -1.9
KRT3P12035 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.16□□□□□ -1.9
KRT3P12035 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.16□□□□□ -1.9
KRT3P12035 AC008885.1-201ENST00000514930 301 ntBASIC3.16□□□□□ -1.9
KRT3P12035 SNORA31.26-201ENST00000517250 137 ntBASIC3.16□□□□□ -1.9
KRT3P12035 MTATP6P15-201ENST00000527233 835 ntBASIC3.16□□□□□ -1.9
KRT3P12035 AL133271.1-201ENST00000538229 291 ntBASIC3.16□□□□□ -1.9
KRT3P12035 MIR544B-201ENST00000582372 78 ntBASIC3.16□□□□□ -1.9
KRT3P12035 AC018714.1-201ENST00000605028 208 ntBASIC3.16□□□□□ -1.9
KRT3P12035 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.16□□□□□ -1.9
KRT3P12035 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.16□□□□□ -1.9
KRT3P12035 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.16□□□□□ -1.9
KRT3P12035 AC120349.3-201ENST00000624377 529 ntBASIC3.16□□□□□ -1.9
KRT3P12035 AC099063.3-201ENST00000642066 185 ntBASIC3.16□□□□□ -1.9
KRT3P12035 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.16□□□□□ -1.9
KRT3P12035 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRT3P12035 API5P2-201ENST00000397055 1498 ntBASIC3.16□□□□□ -1.9
KRT3P12035 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
KRT3P12035 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.15□□□□□ -1.9
KRT3P12035 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
KRT3P12035 AC092447.10-201ENST00000620607 1652 ntBASIC3.15□□□□□ -1.9
KRT3P12035 AC092125.1-201ENST00000562568 1995 ntBASIC3.15□□□□□ -1.91
KRT3P12035 SNORA71.1-201ENST00000364523 117 ntBASIC3.15□□□□□ -1.91
KRT3P12035 MIR493-201ENST00000385254 89 ntBASIC3.15□□□□□ -1.91
KRT3P12035 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.15□□□□□ -1.91
KRT3P12035 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.15□□□□□ -1.91
KRT3P12035 RPL21P32-201ENST00000419877 477 ntBASIC3.15□□□□□ -1.91
KRT3P12035 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.15□□□□□ -1.91
KRT3P12035 UBE2FP3-201ENST00000436366 524 ntBASIC3.15□□□□□ -1.91
KRT3P12035 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.15□□□□□ -1.91
KRT3P12035 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.15□□□□□ -1.91
KRT3P12035 MTND2P24-201ENST00000453434 806 ntBASIC3.15□□□□□ -1.91
KRT3P12035 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.15□□□□□ -1.91
KRT3P12035 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.15□□□□□ -1.91
KRT3P12035 AC111000.2-201ENST00000507775 550 ntBASIC3.15□□□□□ -1.91
KRT3P12035 PSMA2P1-201ENST00000526365 646 ntBASIC3.15□□□□□ -1.91
KRT3P12035 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
KRT3P12035 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.15□□□□□ -1.91
KRT3P12035 AC007954.1-201ENST00000554198 494 ntBASIC3.15□□□□□ -1.91
KRT3P12035 AC145350.1-201ENST00000567426 208 ntBASIC3.15□□□□□ -1.91
KRT3P12035 AC060771.1-201ENST00000582031 164 ntBASIC3.15□□□□□ -1.91
KRT3P12035 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.15□□□□□ -1.91
KRT3P12035 AC112204.3-201ENST00000623822 332 ntBASIC3.15□□□□□ -1.91
KRT3P12035 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
KRT3P12035 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.15□□□□□ -1.91
KRT3P12035 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
KRT3P12035 MAPK10-322ENST00000641485 4530 ntBASIC3.15□□□□□ -1.91
KRT3P12035 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.15□□□□□ -1.91
KRT3P12035 AC005832.2-201ENST00000538921 1430 ntBASIC3.14□□□□□ -1.91
KRT3P12035 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
KRT3P12035 RNU5A-1-201ENST00000362698 116 ntBASIC3.14□□□□□ -1.91
KRT3P12035 MIR887-201ENST00000401258 79 ntBASIC3.14□□□□□ -1.91
KRT3P12035 U3.42-201ENST00000408746 214 ntBASIC3.14□□□□□ -1.91
KRT3P12035 RNU6-516P-201ENST00000411381 104 ntBASIC3.14□□□□□ -1.91
KRT3P12035 AL359704.1-201ENST00000411586 781 ntBASIC3.14□□□□□ -1.91
KRT3P12035 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.14□□□□□ -1.91
KRT3P12035 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.14□□□□□ -1.91
KRT3P12035 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.14□□□□□ -1.91
KRT3P12035 FAM103A2P-201ENST00000444122 354 ntBASIC3.14□□□□□ -1.91
KRT3P12035 AL606662.1-201ENST00000445763 553 ntBASIC3.14□□□□□ -1.91
KRT3P12035 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.14□□□□□ -1.91
KRT3P12035 AL133217.1-201ENST00000450980 425 ntBASIC3.14□□□□□ -1.91
KRT3P12035 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.14□□□□□ -1.91
KRT3P12035 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.14□□□□□ -1.91
KRT3P12035 AC117440.1-201ENST00000474107 571 ntBASIC3.14□□□□□ -1.91
KRT3P12035 AC068587.2-201ENST00000478386 781 ntBASIC3.14□□□□□ -1.91
KRT3P12035 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.14□□□□□ -1.91
KRT3P12035 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
KRT3P12035 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC3.14□□□□□ -1.91
KRT3P12035 AF131216.2-201ENST00000512316 564 ntBASIC3.14□□□□□ -1.91
KRT3P12035 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 154 ms