Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC2.03□□□□□ -2.08
HLA-DQB2P05538 CBWD4P-201ENST00000445695 655 ntBASIC2.03□□□□□ -2.08
HLA-DQB2P05538 AL050341.1-201ENST00000447743 313 ntBASIC2.03□□□□□ -2.08
HLA-DQB2P05538 CDC42P1-201ENST00000456658 548 ntBASIC2.03□□□□□ -2.08
HLA-DQB2P05538 AC090255.1-201ENST00000495779 349 ntBASIC2.03□□□□□ -2.08
HLA-DQB2P05538 RPS29P21-201ENST00000496272 170 ntBASIC2.03□□□□□ -2.08
HLA-DQB2P05538 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.03□□□□□ -2.08
HLA-DQB2P05538 AC084024.2-201ENST00000503480 791 ntBASIC2.03□□□□□ -2.08
HLA-DQB2P05538 AC109471.1-201ENST00000511631 612 ntBASIC2.03□□□□□ -2.08
HLA-DQB2P05538 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.03□□□□□ -2.08
HLA-DQB2P05538 AP000889.1-201ENST00000530968 660 ntBASIC2.03□□□□□ -2.08
HLA-DQB2P05538 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.03□□□□□ -2.08
HLA-DQB2P05538 HMGB1P14-201ENST00000557424 591 ntBASIC2.03□□□□□ -2.08
HLA-DQB2P05538 RPS3AP23-202ENST00000574601 686 ntBASIC2.03□□□□□ -2.08
HLA-DQB2P05538 MIR5089-201ENST00000580047 84 ntBASIC2.03□□□□□ -2.08
HLA-DQB2P05538 MIR4648-201ENST00000580107 72 ntBASIC2.03□□□□□ -2.08
HLA-DQB2P05538 AC097504.2-201ENST00000608088 454 ntBASIC2.03□□□□□ -2.08
HLA-DQB2P05538 AP001521.1-201ENST00000609150 300 ntBASIC2.03□□□□□ -2.08
HLA-DQB2P05538 YWHAEP7-203ENST00000622054 312 ntBASIC2.03□□□□□ -2.08
HLA-DQB2P05538 AP000553.5-201ENST00000641933 54 ntBASIC2.03□□□□□ -2.08
HLA-DQB2P05538 SDAD1P2-201ENST00000441308 2028 ntBASIC2.03□□□□□ -2.08
HLA-DQB2P05538 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.02□□□□□ -2.09
HLA-DQB2P05538 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.02□□□□□ -2.09
HLA-DQB2P05538 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.02□□□□□ -2.09
HLA-DQB2P05538 RNU6-270P-201ENST00000364131 105 ntBASIC2.02□□□□□ -2.09
HLA-DQB2P05538 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.02□□□□□ -2.09
HLA-DQB2P05538 AL079342.1-201ENST00000401460 267 ntBASIC2.02□□□□□ -2.09
HLA-DQB2P05538 AL513475.1-201ENST00000406602 315 ntBASIC2.02□□□□□ -2.09
HLA-DQB2P05538 AL445183.3-201ENST00000414168 502 ntBASIC2.02□□□□□ -2.09
HLA-DQB2P05538 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.02□□□□□ -2.09
HLA-DQB2P05538 AC002542.1-201ENST00000440683 193 ntBASIC2.02□□□□□ -2.09
HLA-DQB2P05538 RAC1P7-201ENST00000445367 377 ntBASIC2.02□□□□□ -2.09
HLA-DQB2P05538 AC009237.8-201ENST00000445492 379 ntBASIC2.02□□□□□ -2.09
HLA-DQB2P05538 GTF2IP12-201ENST00000456547 356 ntBASIC2.02□□□□□ -2.09
HLA-DQB2P05538 RPL31P60-201ENST00000478450 367 ntBASIC2.02□□□□□ -2.09
HLA-DQB2P05538 OR52A4P-202ENST00000481634 799 ntBASIC2.02□□□□□ -2.09
HLA-DQB2P05538 RPS27P26-201ENST00000494583 239 ntBASIC2.02□□□□□ -2.09
HLA-DQB2P05538 RPL30P5-201ENST00000494923 336 ntBASIC2.02□□□□□ -2.09
HLA-DQB2P05538 AC048346.1-201ENST00000510247 144 ntBASIC2.02□□□□□ -2.09
HLA-DQB2P05538 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.02□□□□□ -2.09
HLA-DQB2P05538 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.02□□□□□ -2.09
HLA-DQB2P05538 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.02□□□□□ -2.09
HLA-DQB2P05538 RNU1-41P-201ENST00000516161 162 ntBASIC2.02□□□□□ -2.09
HLA-DQB2P05538 RNU6-751P-201ENST00000516382 101 ntBASIC2.02□□□□□ -2.09
HLA-DQB2P05538 RNU1-48P-201ENST00000516400 162 ntBASIC2.02□□□□□ -2.09
HLA-DQB2P05538 RNU1-40P-201ENST00000516816 164 ntBASIC2.02□□□□□ -2.09
HLA-DQB2P05538 RNU1-97P-201ENST00000516872 164 ntBASIC2.02□□□□□ -2.09
HLA-DQB2P05538 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.02□□□□□ -2.09
HLA-DQB2P05538 AP000916.1-201ENST00000533869 835 ntBASIC2.02□□□□□ -2.09
HLA-DQB2P05538 AC007115.1-201ENST00000546853 234 ntBASIC2.02□□□□□ -2.09
HLA-DQB2P05538 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.02□□□□□ -2.09
HLA-DQB2P05538 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.02□□□□□ -2.09
HLA-DQB2P05538 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.02□□□□□ -2.09
HLA-DQB2P05538 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
HLA-DQB2P05538 AMZ2P1-203ENST00000565833 850 ntBASIC2.02□□□□□ -2.09
HLA-DQB2P05538 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.02□□□□□ -2.09
HLA-DQB2P05538 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.02□□□□□ -2.09
HLA-DQB2P05538 AL161629.2-201ENST00000615347 275 ntBASIC2.02□□□□□ -2.09
HLA-DQB2P05538 AC079597.1-201ENST00000624306 508 ntBASIC2.02□□□□□ -2.09
HLA-DQB2P05538 AC106730.3-201ENST00000624568 641 ntBASIC2.02□□□□□ -2.09
HLA-DQB2P05538 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.02□□□□□ -2.09
HLA-DQB2P05538 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
HLA-DQB2P05538 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
HLA-DQB2P05538 TPTE2P4-201ENST00000258589 1605 ntBASIC2.02□□□□□ -2.09
HLA-DQB2P05538 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
HLA-DQB2P05538 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
HLA-DQB2P05538 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.01□□□□□ -2.09
HLA-DQB2P05538 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
HLA-DQB2P05538 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.01□□□□□ -2.09
HLA-DQB2P05538 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
HLA-DQB2P05538 SNORA70B-201ENST00000384210 135 ntBASIC2.01□□□□□ -2.09
HLA-DQB2P05538 TAS2R15P-201ENST00000390674 928 ntBASIC2.01□□□□□ -2.09
HLA-DQB2P05538 AC016769.3-201ENST00000396562 315 ntBASIC2.01□□□□□ -2.09
HLA-DQB2P05538 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
HLA-DQB2P05538 RNU2-15P-201ENST00000410692 191 ntBASIC2.01□□□□□ -2.09
HLA-DQB2P05538 MTND1P23-201ENST00000416931 372 ntBASIC2.01□□□□□ -2.09
HLA-DQB2P05538 MORF4L1P6-201ENST00000418771 268 ntBASIC2.01□□□□□ -2.09
HLA-DQB2P05538 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.01□□□□□ -2.09
HLA-DQB2P05538 AC090774.1-201ENST00000435925 246 ntBASIC2.01□□□□□ -2.09
HLA-DQB2P05538 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
HLA-DQB2P05538 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.01□□□□□ -2.09
HLA-DQB2P05538 AL691517.1-201ENST00000440833 1235 ntBASIC2.01□□□□□ -2.09
HLA-DQB2P05538 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.01□□□□□ -2.09
HLA-DQB2P05538 WASF1P1-201ENST00000447560 1131 ntBASIC2.01□□□□□ -2.09
HLA-DQB2P05538 AC104164.3-201ENST00000467363 1258 ntBASIC2.01□□□□□ -2.09
HLA-DQB2P05538 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC2.01□□□□□ -2.09
HLA-DQB2P05538 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
HLA-DQB2P05538 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
HLA-DQB2P05538 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
HLA-DQB2P05538 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.01□□□□□ -2.09
HLA-DQB2P05538 AC025768.1-201ENST00000510057 267 ntBASIC2.01□□□□□ -2.09
HLA-DQB2P05538 AC109464.2-201ENST00000510242 943 ntBASIC2.01□□□□□ -2.09
HLA-DQB2P05538 OR5BM1P-201ENST00000512021 366 ntBASIC2.01□□□□□ -2.09
HLA-DQB2P05538 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
HLA-DQB2P05538 RNU6-798P-201ENST00000516912 103 ntBASIC2.01□□□□□ -2.09
HLA-DQB2P05538 RNA5SP135-201ENST00000517019 125 ntBASIC2.01□□□□□ -2.09
HLA-DQB2P05538 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.01□□□□□ -2.09
HLA-DQB2P05538 SUB1P1-201ENST00000524415 382 ntBASIC2.01□□□□□ -2.09
HLA-DQB2P05538 SETP7-201ENST00000552169 453 ntBASIC2.01□□□□□ -2.09
HLA-DQB2P05538 AC090888.1-201ENST00000561335 1141 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms