Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AC105224.1-201ENST00000587055 421 ntBASIC2.96□□□□□ -1.94
MT-ND1P03886 AF131215.7-201ENST00000602443 707 ntBASIC2.96□□□□□ -1.94
MT-ND1P03886 AP001981.2-201ENST00000603241 418 ntBASIC2.96□□□□□ -1.94
MT-ND1P03886 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC2.96□□□□□ -1.94
MT-ND1P03886 AL157817.1-201ENST00000614264 790 ntBASIC2.96□□□□□ -1.94
MT-ND1P03886 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.96□□□□□ -1.94
MT-ND1P03886 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
MT-ND1P03886 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
MT-ND1P03886 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
MT-ND1P03886 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
MT-ND1P03886 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC2.96□□□□□ -1.94
MT-ND1P03886 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.96□□□□□ -1.94
MT-ND1P03886 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
MT-ND1P03886 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.95□□□□□ -1.94
MT-ND1P03886 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.95□□□□□ -1.94
MT-ND1P03886 Y_RNA.234-201ENST00000364409 97 ntBASIC2.95□□□□□ -1.94
MT-ND1P03886 SNORA51.4-201ENST00000364993 124 ntBASIC2.95□□□□□ -1.94
MT-ND1P03886 SNORD116-9-201ENST00000384000 95 ntBASIC2.95□□□□□ -1.94
MT-ND1P03886 SNORD116-3-201ENST00000384287 95 ntBASIC2.95□□□□□ -1.94
MT-ND1P03886 SNORD116-7-201ENST00000384404 95 ntBASIC2.95□□□□□ -1.94
MT-ND1P03886 SNORD116-5-201ENST00000384462 95 ntBASIC2.95□□□□□ -1.94
MT-ND1P03886 CYCSP46-201ENST00000423569 204 ntBASIC2.95□□□□□ -1.94
MT-ND1P03886 RPL7P46-201ENST00000425129 740 ntBASIC2.95□□□□□ -1.94
MT-ND1P03886 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.95□□□□□ -1.94
MT-ND1P03886 DPPA2P1-201ENST00000428060 556 ntBASIC2.95□□□□□ -1.94
MT-ND1P03886 RPL23AP69-201ENST00000431134 458 ntBASIC2.95□□□□□ -1.94
MT-ND1P03886 OR2B8P-201ENST00000432841 938 ntBASIC2.95□□□□□ -1.94
MT-ND1P03886 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.95□□□□□ -1.94
MT-ND1P03886 THAP5P1-201ENST00000439089 262 ntBASIC2.95□□□□□ -1.94
MT-ND1P03886 GDI2P2-201ENST00000445131 608 ntBASIC2.95□□□□□ -1.94
MT-ND1P03886 TAF9P1-201ENST00000445421 515 ntBASIC2.95□□□□□ -1.94
MT-ND1P03886 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.95□□□□□ -1.94
MT-ND1P03886 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.95□□□□□ -1.94
MT-ND1P03886 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.95□□□□□ -1.94
MT-ND1P03886 AC234775.1-201ENST00000454247 670 ntBASIC2.95□□□□□ -1.94
MT-ND1P03886 TAF9P2-201ENST00000454958 515 ntBASIC2.95□□□□□ -1.94
MT-ND1P03886 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.95□□□□□ -1.94
MT-ND1P03886 OR6K1P-201ENST00000456766 971 ntBASIC2.95□□□□□ -1.94
MT-ND1P03886 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.95□□□□□ -1.94
MT-ND1P03886 AL049714.1-201ENST00000466686 347 ntBASIC2.95□□□□□ -1.94
MT-ND1P03886 RN7SL542P-201ENST00000467147 294 ntBASIC2.95□□□□□ -1.94
MT-ND1P03886 AC006499.5-201ENST00000505037 514 ntBASIC2.95□□□□□ -1.94
MT-ND1P03886 RNU6-714P-201ENST00000516963 103 ntBASIC2.95□□□□□ -1.94
MT-ND1P03886 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC2.95□□□□□ -1.94
MT-ND1P03886 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.95□□□□□ -1.94
MT-ND1P03886 AC091489.2-201ENST00000566263 604 ntBASIC2.95□□□□□ -1.94
MT-ND1P03886 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.95□□□□□ -1.94
MT-ND1P03886 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.95□□□□□ -1.94
MT-ND1P03886 MIR3922-201ENST00000585192 84 ntBASIC2.95□□□□□ -1.94
MT-ND1P03886 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC2.95□□□□□ -1.94
MT-ND1P03886 AC092354.1-201ENST00000606057 376 ntBASIC2.95□□□□□ -1.94
MT-ND1P03886 uc_338.25-201ENST00000613756 156 ntBASIC2.95□□□□□ -1.94
MT-ND1P03886 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.95□□□□□ -1.94
MT-ND1P03886 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.95□□□□□ -1.94
MT-ND1P03886 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
MT-ND1P03886 AC008443.7-201ENST00000622195 246 ntBASIC2.95□□□□□ -1.94
MT-ND1P03886 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.95□□□□□ -1.94
MT-ND1P03886 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.95□□□□□ -1.94
MT-ND1P03886 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
MT-ND1P03886 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.95□□□□□ -1.94
MT-ND1P03886 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.94□□□□□ -1.94
MT-ND1P03886 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC2.94□□□□□ -1.94
MT-ND1P03886 Z83843.1-201ENST00000604070 3685 ntBASIC2.94□□□□□ -1.94
MT-ND1P03886 RNU5F-6P-201ENST00000362979 116 ntBASIC2.94□□□□□ -1.94
MT-ND1P03886 RNU6-501P-201ENST00000364072 100 ntBASIC2.94□□□□□ -1.94
MT-ND1P03886 MTCYBP36-201ENST00000404146 440 ntBASIC2.94□□□□□ -1.94
MT-ND1P03886 HMGN1P24-201ENST00000412282 298 ntBASIC2.94□□□□□ -1.94
MT-ND1P03886 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.94□□□□□ -1.94
MT-ND1P03886 AC063979.1-201ENST00000415539 377 ntBASIC2.94□□□□□ -1.94
MT-ND1P03886 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.94□□□□□ -1.94
MT-ND1P03886 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.94□□□□□ -1.94
MT-ND1P03886 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.94□□□□□ -1.94
MT-ND1P03886 MTND1P30-201ENST00000441241 901 ntBASIC2.94□□□□□ -1.94
MT-ND1P03886 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC2.94□□□□□ -1.94
MT-ND1P03886 PAXBP1P1-201ENST00000449315 447 ntBASIC2.94□□□□□ -1.94
MT-ND1P03886 AL031183.1-201ENST00000457667 207 ntBASIC2.94□□□□□ -1.94
MT-ND1P03886 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC2.94□□□□□ -1.94
MT-ND1P03886 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.94□□□□□ -1.94
MT-ND1P03886 DSTNP2-201ENST00000504533 515 ntBASIC2.94□□□□□ -1.94
MT-ND1P03886 AC022447.3-201ENST00000506865 495 ntBASIC2.94□□□□□ -1.94
MT-ND1P03886 AC105313.1-201ENST00000509121 353 ntBASIC2.94□□□□□ -1.94
MT-ND1P03886 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.94□□□□□ -1.94
MT-ND1P03886 AC017037.2-201ENST00000513850 890 ntBASIC2.94□□□□□ -1.94
MT-ND1P03886 RNA5SP385-201ENST00000515947 110 ntBASIC2.94□□□□□ -1.94
MT-ND1P03886 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC2.94□□□□□ -1.94
MT-ND1P03886 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.94□□□□□ -1.94
MT-ND1P03886 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2.94□□□□□ -1.94
MT-ND1P03886 PCMTD1P2-201ENST00000565017 355 ntBASIC2.94□□□□□ -1.94
MT-ND1P03886 AC034268.2-201ENST00000571784 482 ntBASIC2.94□□□□□ -1.94
MT-ND1P03886 ZNF415P1-201ENST00000582279 1166 ntBASIC2.94□□□□□ -1.94
MT-ND1P03886 MIR4307-201ENST00000582802 84 ntBASIC2.94□□□□□ -1.94
MT-ND1P03886 AC073657.2-201ENST00000605661 303 ntBASIC2.94□□□□□ -1.94
MT-ND1P03886 AC245008.1-201ENST00000608123 476 ntBASIC2.94□□□□□ -1.94
MT-ND1P03886 AC073114.1-201ENST00000612027 490 ntBASIC2.94□□□□□ -1.94
MT-ND1P03886 AC100793.4-201ENST00000613683 429 ntBASIC2.94□□□□□ -1.94
MT-ND1P03886 AL355365.1-201ENST00000616480 294 ntBASIC2.94□□□□□ -1.94
MT-ND1P03886 Z69908.1-201ENST00000622603 247 ntBASIC2.94□□□□□ -1.94
MT-ND1P03886 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.94□□□□□ -1.94
MT-ND1P03886 AP003399.1-201ENST00000637534 361 ntBASIC2.94□□□□□ -1.94
MT-ND1P03886 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 151.5 ms