Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AL691482.1-201ENST00000453255 87 ntBASIC4.33□□□□□ -1.72
CNOT4O95628 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.33□□□□□ -1.72
CNOT4O95628 RPL21P104-201ENST00000464143 478 ntBASIC4.33□□□□□ -1.72
CNOT4O95628 HMGB1P25-201ENST00000468402 607 ntBASIC4.33□□□□□ -1.72
CNOT4O95628 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.33□□□□□ -1.72
CNOT4O95628 MRPS33P2-201ENST00000507850 322 ntBASIC4.33□□□□□ -1.72
CNOT4O95628 VWA8P1-201ENST00000510889 176 ntBASIC4.33□□□□□ -1.72
CNOT4O95628 AC017037.2-201ENST00000513850 890 ntBASIC4.33□□□□□ -1.72
CNOT4O95628 ENPP7P9-201ENST00000514456 627 ntBASIC4.33□□□□□ -1.72
CNOT4O95628 RNU6-256P-201ENST00000516747 97 ntBASIC4.33□□□□□ -1.72
CNOT4O95628 SNORA31.20-201ENST00000517111 133 ntBASIC4.33□□□□□ -1.72
CNOT4O95628 RN7SKP295-201ENST00000517264 153 ntBASIC4.33□□□□□ -1.72
CNOT4O95628 AC009902.1-201ENST00000519351 183 ntBASIC4.33□□□□□ -1.72
CNOT4O95628 AC090136.1-201ENST00000520009 240 ntBASIC4.33□□□□□ -1.72
CNOT4O95628 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.33□□□□□ -1.72
CNOT4O95628 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.33□□□□□ -1.72
CNOT4O95628 AP003122.3-201ENST00000526316 255 ntBASIC4.33□□□□□ -1.72
CNOT4O95628 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.33□□□□□ -1.72
CNOT4O95628 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.33□□□□□ -1.72
CNOT4O95628 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.33□□□□□ -1.72
CNOT4O95628 AC110588.1-201ENST00000559699 137 ntBASIC4.33□□□□□ -1.72
CNOT4O95628 AC020910.3-201ENST00000603701 874 ntBASIC4.33□□□□□ -1.72
CNOT4O95628 AC104662.1-201ENST00000604448 511 ntBASIC4.33□□□□□ -1.72
CNOT4O95628 AL031176.1-201ENST00000604554 466 ntBASIC4.33□□□□□ -1.72
CNOT4O95628 AL391358.1-201ENST00000605342 190 ntBASIC4.33□□□□□ -1.72
CNOT4O95628 AC006023.2-201ENST00000609916 167 ntBASIC4.33□□□□□ -1.72
CNOT4O95628 AC023043.4-201ENST00000612081 449 ntBASIC4.33□□□□□ -1.72
CNOT4O95628 MIR6780A-201ENST00000615089 68 ntBASIC4.33□□□□□ -1.72
CNOT4O95628 AC133104.2-201ENST00000615272 193 ntBASIC4.33□□□□□ -1.72
CNOT4O95628 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CNOT4O95628 AC087190.4-201ENST00000574616 8334 ntBASIC4.33□□□□□ -1.72
CNOT4O95628 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CNOT4O95628 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
CNOT4O95628 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CNOT4O95628 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
CNOT4O95628 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.32□□□□□ -1.72
CNOT4O95628 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.32□□□□□ -1.72
CNOT4O95628 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CNOT4O95628 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CNOT4O95628 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CNOT4O95628 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.32□□□□□ -1.72
CNOT4O95628 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
CNOT4O95628 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CNOT4O95628 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CNOT4O95628 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CNOT4O95628 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CNOT4O95628 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CNOT4O95628 RNU2-36P-201ENST00000410361 191 ntBASIC4.32□□□□□ -1.72
CNOT4O95628 RNA5SP113-201ENST00000410486 84 ntBASIC4.32□□□□□ -1.72
CNOT4O95628 RNU2-37P-201ENST00000410695 177 ntBASIC4.32□□□□□ -1.72
CNOT4O95628 RNU6-954P-201ENST00000411355 107 ntBASIC4.32□□□□□ -1.72
CNOT4O95628 VDAC1P9-201ENST00000412766 841 ntBASIC4.32□□□□□ -1.72
CNOT4O95628 RPL31P12-201ENST00000422587 358 ntBASIC4.32□□□□□ -1.72
CNOT4O95628 MTCYBP10-201ENST00000424905 650 ntBASIC4.32□□□□□ -1.72
CNOT4O95628 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.32□□□□□ -1.72
CNOT4O95628 AC092162.1-201ENST00000432828 434 ntBASIC4.32□□□□□ -1.72
CNOT4O95628 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.32□□□□□ -1.72
CNOT4O95628 TXNP1-201ENST00000441872 371 ntBASIC4.32□□□□□ -1.72
CNOT4O95628 AC016696.1-201ENST00000446949 318 ntBASIC4.32□□□□□ -1.72
CNOT4O95628 AURKAPS2-201ENST00000454983 333 ntBASIC4.32□□□□□ -1.72
CNOT4O95628 BTF3P15-201ENST00000455606 336 ntBASIC4.32□□□□□ -1.72
CNOT4O95628 MTCO3P10-201ENST00000455912 772 ntBASIC4.32□□□□□ -1.72
CNOT4O95628 RPS5P7-201ENST00000456664 608 ntBASIC4.32□□□□□ -1.72
CNOT4O95628 ZFRP1-201ENST00000457579 2970 ntBASIC4.32□□□□□ -1.72
CNOT4O95628 RPL7P43-201ENST00000478876 753 ntBASIC4.32□□□□□ -1.72
CNOT4O95628 RPS27P27-201ENST00000498779 255 ntBASIC4.32□□□□□ -1.72
CNOT4O95628 AC017037.1-201ENST00000508460 471 ntBASIC4.32□□□□□ -1.72
CNOT4O95628 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.32□□□□□ -1.72
CNOT4O95628 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.32□□□□□ -1.72
CNOT4O95628 FAM60DP-201ENST00000524174 632 ntBASIC4.32□□□□□ -1.72
CNOT4O95628 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.32□□□□□ -1.72
CNOT4O95628 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.32□□□□□ -1.72
CNOT4O95628 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.32□□□□□ -1.72
CNOT4O95628 AL133153.1-201ENST00000557756 303 ntBASIC4.32□□□□□ -1.72
CNOT4O95628 MIR4284-201ENST00000578924 81 ntBASIC4.32□□□□□ -1.72
CNOT4O95628 AC091042.1-201ENST00000579213 173 ntBASIC4.32□□□□□ -1.72
CNOT4O95628 MIR3667-201ENST00000581025 74 ntBASIC4.32□□□□□ -1.72
CNOT4O95628 AF038458.1-201ENST00000588406 262 ntBASIC4.32□□□□□ -1.72
CNOT4O95628 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.32□□□□□ -1.72
CNOT4O95628 AC092747.3-201ENST00000603769 301 ntBASIC4.32□□□□□ -1.72
CNOT4O95628 AL670379.11-201ENST00000604059 253 ntBASIC4.32□□□□□ -1.72
CNOT4O95628 AL670379.10-201ENST00000604330 253 ntBASIC4.32□□□□□ -1.72
CNOT4O95628 AL670379.12-201ENST00000605291 253 ntBASIC4.32□□□□□ -1.72
CNOT4O95628 AL670379.9-201ENST00000605428 253 ntBASIC4.32□□□□□ -1.72
CNOT4O95628 AL157817.1-201ENST00000614264 790 ntBASIC4.32□□□□□ -1.72
CNOT4O95628 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CNOT4O95628 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC4.32□□□□□ -1.72
CNOT4O95628 AC025034.2-201ENST00000623264 286 ntBASIC4.32□□□□□ -1.72
CNOT4O95628 AL136313.1-201ENST00000624804 202 ntBASIC4.32□□□□□ -1.72
CNOT4O95628 AC119674.1-207ENST00000641355 633 ntBASIC4.32□□□□□ -1.72
CNOT4O95628 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
CNOT4O95628 AC139713.2-215ENST00000641428 5037 ntBASIC4.32□□□□□ -1.72
CNOT4O95628 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CNOT4O95628 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.32□□□□□ -1.72
CNOT4O95628 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CNOT4O95628 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CNOT4O95628 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CNOT4O95628 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CNOT4O95628 MARK2P15-201ENST00000432204 2186 ntBASIC4.31□□□□□ -1.72
CNOT4O95628 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms