Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.16□□□□□ -2.06
UPK1BO75841 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.16□□□□□ -2.06
UPK1BO75841 MTND4LP5-201ENST00000605152 292 ntBASIC2.16□□□□□ -2.06
UPK1BO75841 AC112220.2-201ENST00000605513 533 ntBASIC2.16□□□□□ -2.06
UPK1BO75841 AC079395.3-201ENST00000615161 484 ntBASIC2.16□□□□□ -2.06
UPK1BO75841 MESTIT1_2.1-201ENST00000616328 235 ntBASIC2.16□□□□□ -2.06
UPK1BO75841 AL445264.1-201ENST00000621719 171 ntBASIC2.16□□□□□ -2.06
UPK1BO75841 AC231657.1-201ENST00000624313 397 ntBASIC2.16□□□□□ -2.06
UPK1BO75841 AL034408.1-202ENST00000636088 415 ntBASIC2.16□□□□□ -2.06
UPK1BO75841 AP000553.5-201ENST00000641933 54 ntBASIC2.16□□□□□ -2.06
UPK1BO75841 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
UPK1BO75841 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
UPK1BO75841 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.15□□□□□ -2.06
UPK1BO75841 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
UPK1BO75841 RNU6-1078P-201ENST00000364522 103 ntBASIC2.15□□□□□ -2.07
UPK1BO75841 SNORA67.1-201ENST00000364749 141 ntBASIC2.15□□□□□ -2.07
UPK1BO75841 RNA5SP37-201ENST00000365420 130 ntBASIC2.15□□□□□ -2.07
UPK1BO75841 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
UPK1BO75841 SNORA41-201ENST00000384675 132 ntBASIC2.15□□□□□ -2.07
UPK1BO75841 RNU6-298P-201ENST00000390888 96 ntBASIC2.15□□□□□ -2.07
UPK1BO75841 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.15□□□□□ -2.07
UPK1BO75841 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC2.15□□□□□ -2.07
UPK1BO75841 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
UPK1BO75841 AC092047.1-201ENST00000424997 240 ntBASIC2.15□□□□□ -2.07
UPK1BO75841 TRBV26OR9-2-201ENST00000432077 293 ntBASIC2.15□□□□□ -2.07
UPK1BO75841 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.15□□□□□ -2.07
UPK1BO75841 ATP5F1P1-201ENST00000433775 569 ntBASIC2.15□□□□□ -2.07
UPK1BO75841 AC006028.1-201ENST00000438379 402 ntBASIC2.15□□□□□ -2.07
UPK1BO75841 Z82210.1-201ENST00000440037 231 ntBASIC2.15□□□□□ -2.07
UPK1BO75841 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.15□□□□□ -2.07
UPK1BO75841 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.15□□□□□ -2.07
UPK1BO75841 SNORD121B-201ENST00000458838 81 ntBASIC2.15□□□□□ -2.07
UPK1BO75841 RPL7P15-201ENST00000461190 712 ntBASIC2.15□□□□□ -2.07
UPK1BO75841 CDC42P4-201ENST00000510507 563 ntBASIC2.15□□□□□ -2.07
UPK1BO75841 MTND4LP31-201ENST00000514859 294 ntBASIC2.15□□□□□ -2.07
UPK1BO75841 RPPH1-2P-201ENST00000516688 293 ntBASIC2.15□□□□□ -2.07
UPK1BO75841 AC009812.2-201ENST00000517657 457 ntBASIC2.15□□□□□ -2.07
UPK1BO75841 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.15□□□□□ -2.07
UPK1BO75841 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.15□□□□□ -2.07
UPK1BO75841 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.15□□□□□ -2.07
UPK1BO75841 OR6C7P-201ENST00000547875 934 ntBASIC2.15□□□□□ -2.07
UPK1BO75841 MTND3P13-201ENST00000574391 343 ntBASIC2.15□□□□□ -2.07
UPK1BO75841 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.15□□□□□ -2.07
UPK1BO75841 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.15□□□□□ -2.07
UPK1BO75841 VN1R85P-201ENST00000601587 426 ntBASIC2.15□□□□□ -2.07
UPK1BO75841 AL136295.6-201ENST00000610486 658 ntBASIC2.15□□□□□ -2.07
UPK1BO75841 AC103798.2-201ENST00000624292 632 ntBASIC2.15□□□□□ -2.07
UPK1BO75841 AL159972.1-201ENST00000625150 448 ntBASIC2.15□□□□□ -2.07
UPK1BO75841 AC068724.3-201ENST00000625906 87 ntBASIC2.15□□□□□ -2.07
UPK1BO75841 AP003399.1-201ENST00000637534 361 ntBASIC2.15□□□□□ -2.07
UPK1BO75841 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
UPK1BO75841 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
UPK1BO75841 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
UPK1BO75841 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
UPK1BO75841 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
UPK1BO75841 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.14□□□□□ -2.07
UPK1BO75841 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.14□□□□□ -2.07
UPK1BO75841 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
UPK1BO75841 SNORA63.1-201ENST00000362493 131 ntBASIC2.14□□□□□ -2.07
UPK1BO75841 RNA5SP124-201ENST00000362739 110 ntBASIC2.14□□□□□ -2.07
UPK1BO75841 RNU6-97P-201ENST00000363387 104 ntBASIC2.14□□□□□ -2.07
UPK1BO75841 RNA5SP456-201ENST00000364002 114 ntBASIC2.14□□□□□ -2.07
UPK1BO75841 RNU6-461P-201ENST00000364195 107 ntBASIC2.14□□□□□ -2.07
UPK1BO75841 RNU6-1207P-201ENST00000384343 107 ntBASIC2.14□□□□□ -2.07
UPK1BO75841 SNORA40.4-201ENST00000390971 128 ntBASIC2.14□□□□□ -2.07
UPK1BO75841 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
UPK1BO75841 AL109755.1-201ENST00000401791 649 ntBASIC2.14□□□□□ -2.07
UPK1BO75841 AL590084.1-201ENST00000407885 387 ntBASIC2.14□□□□□ -2.07
UPK1BO75841 RNU2-25P-201ENST00000411041 191 ntBASIC2.14□□□□□ -2.07
UPK1BO75841 RPS29P4-201ENST00000414733 161 ntBASIC2.14□□□□□ -2.07
UPK1BO75841 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.14□□□□□ -2.07
UPK1BO75841 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC2.14□□□□□ -2.07
UPK1BO75841 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
UPK1BO75841 AL358075.3-201ENST00000426289 226 ntBASIC2.14□□□□□ -2.07
UPK1BO75841 AL139132.1-201ENST00000431587 344 ntBASIC2.14□□□□□ -2.07
UPK1BO75841 GTF2IP3-201ENST00000433887 494 ntBASIC2.14□□□□□ -2.07
UPK1BO75841 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
UPK1BO75841 RPL23AP76-201ENST00000441860 458 ntBASIC2.14□□□□□ -2.07
UPK1BO75841 ARPC3P5-201ENST00000448802 534 ntBASIC2.14□□□□□ -2.07
UPK1BO75841 AC097493.1-201ENST00000463958 372 ntBASIC2.14□□□□□ -2.07
UPK1BO75841 AC079203.1-201ENST00000487972 404 ntBASIC2.14□□□□□ -2.07
UPK1BO75841 RPS29P20-201ENST00000489592 171 ntBASIC2.14□□□□□ -2.07
UPK1BO75841 AC090255.1-201ENST00000495779 349 ntBASIC2.14□□□□□ -2.07
UPK1BO75841 EIF4EP3-201ENST00000498782 656 ntBASIC2.14□□□□□ -2.07
UPK1BO75841 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.14□□□□□ -2.07
UPK1BO75841 RNU6-150P-201ENST00000516237 95 ntBASIC2.14□□□□□ -2.07
UPK1BO75841 RNA5SP471-201ENST00000516971 106 ntBASIC2.14□□□□□ -2.07
UPK1BO75841 LRRC6P1-201ENST00000532188 885 ntBASIC2.14□□□□□ -2.07
UPK1BO75841 AC005832.3-201ENST00000537929 631 ntBASIC2.14□□□□□ -2.07
UPK1BO75841 TRAV28-201ENST00000557548 323 ntBASIC2.14□□□□□ -2.07
UPK1BO75841 AC087465.1-201ENST00000560574 245 ntBASIC2.14□□□□□ -2.07
UPK1BO75841 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.14□□□□□ -2.07
UPK1BO75841 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC2.14□□□□□ -2.07
UPK1BO75841 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC2.14□□□□□ -2.07
UPK1BO75841 AC005498.1-201ENST00000592125 465 ntBASIC2.14□□□□□ -2.07
UPK1BO75841 VN1R83P-201ENST00000595685 445 ntBASIC2.14□□□□□ -2.07
UPK1BO75841 AL606834.2-201ENST00000602954 668 ntBASIC2.14□□□□□ -2.07
UPK1BO75841 AC024060.1-201ENST00000607052 494 ntBASIC2.14□□□□□ -2.07
UPK1BO75841 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.14□□□□□ -2.07
UPK1BO75841 AC245517.5-201ENST00000611529 162 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 158.5 ms