Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC0.62□□□□□ -2.31
USH2AO75445 AC244035.1-201ENST00000430042 390 ntBASIC0.62□□□□□ -2.31
USH2AO75445 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC0.62□□□□□ -2.31
USH2AO75445 RPL34P26-201ENST00000445636 354 ntBASIC0.62□□□□□ -2.31
USH2AO75445 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC0.62□□□□□ -2.31
USH2AO75445 RPL21P131-201ENST00000497298 483 ntBASIC0.62□□□□□ -2.31
USH2AO75445 AC109471.1-201ENST00000511631 612 ntBASIC0.62□□□□□ -2.31
USH2AO75445 NDUFB4P9-201ENST00000511646 388 ntBASIC0.62□□□□□ -2.31
USH2AO75445 AL845331.3-202ENST00000562856 261 ntBASIC0.62□□□□□ -2.31
USH2AO75445 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC0.62□□□□□ -2.31
USH2AO75445 MZT1P2-201ENST00000604387 248 ntBASIC0.62□□□□□ -2.31
USH2AO75445 MIR502-201ENST00000606349 86 ntBASIC0.62□□□□□ -2.31
USH2AO75445 AL135786.2-201ENST00000608422 615 ntBASIC0.62□□□□□ -2.31
USH2AO75445 SGO1P2-201ENST00000429458 1589 ntBASIC0.62□□□□□ -2.31
USH2AO75445 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
USH2AO75445 SNORA16.1-201ENST00000364597 132 ntBASIC0.62□□□□□ -2.31
USH2AO75445 RNU1-78P-201ENST00000391248 165 ntBASIC0.62□□□□□ -2.31
USH2AO75445 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC0.62□□□□□ -2.31
USH2AO75445 HMGN1P8-201ENST00000463578 288 ntBASIC0.62□□□□□ -2.31
USH2AO75445 AC010735.1-201ENST00000567305 1026 ntBASIC0.62□□□□□ -2.31
USH2AO75445 AC124283.4-201ENST00000581815 456 ntBASIC0.62□□□□□ -2.31
USH2AO75445 VN1R107P-201ENST00000601784 209 ntBASIC0.62□□□□□ -2.31
USH2AO75445 AC006254.3-201ENST00000603353 884 ntBASIC0.62□□□□□ -2.31
USH2AO75445 AC092447.7-201ENST00000422212 1621 ntBASIC0.62□□□□□ -2.31
USH2AO75445 RNU6-670P-201ENST00000364312 104 ntBASIC0.62□□□□□ -2.31
USH2AO75445 Y_RNA.280-201ENST00000364765 112 ntBASIC0.62□□□□□ -2.31
USH2AO75445 SNORA68.2-201ENST00000391263 128 ntBASIC0.62□□□□□ -2.31
USH2AO75445 MCTS2P-201ENST00000394552 546 ntBASIC0.62□□□□□ -2.31
USH2AO75445 RPL7P34-201ENST00000433316 712 ntBASIC0.62□□□□□ -2.31
USH2AO75445 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.62□□□□□ -2.31
USH2AO75445 AC110792.2-201ENST00000510278 224 ntBASIC0.62□□□□□ -2.31
USH2AO75445 RNU6-826P-201ENST00000516827 104 ntBASIC0.62□□□□□ -2.31
USH2AO75445 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC0.62□□□□□ -2.31
USH2AO75445 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
USH2AO75445 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
USH2AO75445 MTND4P31-201ENST00000425607 1343 ntBASIC0.62□□□□□ -2.31
USH2AO75445 RNU6-716P-201ENST00000365621 103 ntBASIC0.62□□□□□ -2.31
USH2AO75445 ZNF965P-201ENST00000432501 817 ntBASIC0.62□□□□□ -2.31
USH2AO75445 OR9N1P-202ENST00000494289 481 ntBASIC0.62□□□□□ -2.31
USH2AO75445 AL389895.1-201ENST00000554127 252 ntBASIC0.62□□□□□ -2.31
USH2AO75445 AC068338.1-201ENST00000565567 176 ntBASIC0.62□□□□□ -2.31
USH2AO75445 Clostridiales-1.2-201ENST00000636724 160 ntBASIC0.62□□□□□ -2.31
USH2AO75445 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC0.62□□□□□ -2.31
USH2AO75445 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC0.62□□□□□ -2.31
USH2AO75445 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
USH2AO75445 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
USH2AO75445 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC0.61□□□□□ -2.31
USH2AO75445 ARF4P2-201ENST00000430209 526 ntBASIC0.61□□□□□ -2.31
USH2AO75445 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC0.61□□□□□ -2.31
USH2AO75445 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC0.61□□□□□ -2.31
USH2AO75445 C1GALT1P2-201ENST00000510813 1104 ntBASIC0.61□□□□□ -2.31
USH2AO75445 AC091488.1-201ENST00000604239 660 ntBASIC0.61□□□□□ -2.31
USH2AO75445 PABPC1P9-201ENST00000426076 1612 ntBASIC0.61□□□□□ -2.31
USH2AO75445 AC018630.2-201ENST00000534866 2403 ntBASIC0.61□□□□□ -2.31
USH2AO75445 MIR1265-201ENST00000408444 86 ntBASIC0.61□□□□□ -2.31
USH2AO75445 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC0.61□□□□□ -2.31
USH2AO75445 RPL21P24-201ENST00000413752 448 ntBASIC0.61□□□□□ -2.31
USH2AO75445 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC0.61□□□□□ -2.31
USH2AO75445 CR848007.2-201ENST00000424918 787 ntBASIC0.61□□□□□ -2.31
USH2AO75445 AL445687.1-201ENST00000439946 251 ntBASIC0.61□□□□□ -2.31
USH2AO75445 RPS27P5-201ENST00000444247 244 ntBASIC0.61□□□□□ -2.31
USH2AO75445 GAS5-AS1-201ENST00000602767 694 ntBASIC0.61□□□□□ -2.31
USH2AO75445 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC0.61□□□□□ -2.31
USH2AO75445 AC074140.1-201ENST00000621617 208 ntBASIC0.61□□□□□ -2.31
USH2AO75445 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.61□□□□□ -2.31
USH2AO75445 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
USH2AO75445 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC0.61□□□□□ -2.31
USH2AO75445 AC107015.1-201ENST00000466902 747 ntBASIC0.61□□□□□ -2.31
USH2AO75445 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC0.61□□□□□ -2.31
USH2AO75445 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC0.61□□□□□ -2.31
USH2AO75445 RNA5SP384-201ENST00000516615 116 ntBASIC0.61□□□□□ -2.31
USH2AO75445 AC092159.4-201ENST00000624944 550 ntBASIC0.61□□□□□ -2.31
USH2AO75445 AC009902.3-201ENST00000606235 2172 ntBASIC0.61□□□□□ -2.31
USH2AO75445 RNF6P1-201ENST00000444889 1784 ntBASIC0.61□□□□□ -2.31
USH2AO75445 AC130650.2-201ENST00000618736 2403 ntBASIC0.61□□□□□ -2.31
USH2AO75445 Y_RNA.412-201ENST00000384001 104 ntBASIC0.61□□□□□ -2.31
USH2AO75445 Y_RNA.571-201ENST00000384753 98 ntBASIC0.61□□□□□ -2.31
USH2AO75445 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC0.61□□□□□ -2.31
USH2AO75445 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC0.61□□□□□ -2.31
USH2AO75445 OR10R1P-201ENST00000441524 1141 ntBASIC0.61□□□□□ -2.31
USH2AO75445 TPT1P14-201ENST00000448018 505 ntBASIC0.61□□□□□ -2.31
USH2AO75445 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC0.61□□□□□ -2.31
USH2AO75445 AC093331.1-201ENST00000521474 169 ntBASIC0.61□□□□□ -2.31
USH2AO75445 IMMP1LP2-201ENST00000552954 492 ntBASIC0.61□□□□□ -2.31
USH2AO75445 MIR6715B-201ENST00000637172 77 ntBASIC0.61□□□□□ -2.31
USH2AO75445 Z99497.1-201ENST00000421282 135 ntBASIC0.61□□□□□ -2.31
USH2AO75445 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC0.61□□□□□ -2.31
USH2AO75445 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC0.61□□□□□ -2.31
USH2AO75445 OOSP1P2-201ENST00000579644 351 ntBASIC0.61□□□□□ -2.31
USH2AO75445 MIR3670-2-201ENST00000582974 65 ntBASIC0.61□□□□□ -2.31
USH2AO75445 MIR3670-1-201ENST00000584160 65 ntBASIC0.61□□□□□ -2.31
USH2AO75445 MIR3670-3-201ENST00000584855 65 ntBASIC0.61□□□□□ -2.31
USH2AO75445 AC006329.2-201ENST00000611491 394 ntBASIC0.61□□□□□ -2.31
USH2AO75445 MIR3670-4-201ENST00000612260 65 ntBASIC0.61□□□□□ -2.31
USH2AO75445 AP001486.2-201ENST00000561652 5113 ntBASIC0.6□□□□□ -2.31
USH2AO75445 AC007390.1-201ENST00000415722 356 ntBASIC0.6□□□□□ -2.31
USH2AO75445 SETP10-201ENST00000424368 814 ntBASIC0.6□□□□□ -2.31
USH2AO75445 NEK4P1-201ENST00000433383 879 ntBASIC0.6□□□□□ -2.31
USH2AO75445 MTCO1P53-201ENST00000441633 699 ntBASIC0.6□□□□□ -2.31
USH2AO75445 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 144.6 ms