Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
GRIN3BO60391 BDP1P-201ENST00000582658 1990 ntBASIC5.22□□□□□ -1.57
GRIN3BO60391 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.22□□□□□ -1.57
GRIN3BO60391 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
GRIN3BO60391 BTBD10P1-201ENST00000549824 1352 ntBASIC5.22□□□□□ -1.57
GRIN3BO60391 RNU6-179P-201ENST00000363350 107 ntBASIC5.22□□□□□ -1.57
GRIN3BO60391 Y_RNA.144-201ENST00000363521 113 ntBASIC5.22□□□□□ -1.57
GRIN3BO60391 RNU6-754P-201ENST00000391166 107 ntBASIC5.22□□□□□ -1.57
GRIN3BO60391 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC5.22□□□□□ -1.57
GRIN3BO60391 RN7SKP58-201ENST00000411010 305 ntBASIC5.22□□□□□ -1.57
GRIN3BO60391 AL590609.2-201ENST00000421430 368 ntBASIC5.22□□□□□ -1.57
GRIN3BO60391 IPO7P1-201ENST00000442031 636 ntBASIC5.22□□□□□ -1.57
GRIN3BO60391 GEMIN8P3-201ENST00000445417 720 ntBASIC5.22□□□□□ -1.57
GRIN3BO60391 AL118520.1-201ENST00000450770 291 ntBASIC5.22□□□□□ -1.57
GRIN3BO60391 AC005008.1-201ENST00000456151 612 ntBASIC5.22□□□□□ -1.57
GRIN3BO60391 SNORD97-201ENST00000459187 142 ntBASIC5.22□□□□□ -1.57
GRIN3BO60391 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC5.22□□□□□ -1.57
GRIN3BO60391 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC5.22□□□□□ -1.57
GRIN3BO60391 AC005798.1-201ENST00000513715 387 ntBASIC5.22□□□□□ -1.57
GRIN3BO60391 RN7SKP289-201ENST00000517244 295 ntBASIC5.22□□□□□ -1.57
GRIN3BO60391 AC022790.1-201ENST00000522872 204 ntBASIC5.22□□□□□ -1.57
GRIN3BO60391 FAM60DP-201ENST00000524174 632 ntBASIC5.22□□□□□ -1.57
GRIN3BO60391 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC5.22□□□□□ -1.57
GRIN3BO60391 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC5.22□□□□□ -1.57
GRIN3BO60391 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC5.22□□□□□ -1.57
GRIN3BO60391 AL355836.1-201ENST00000555951 870 ntBASIC5.22□□□□□ -1.57
GRIN3BO60391 AC020661.2-201ENST00000560114 134 ntBASIC5.22□□□□□ -1.57
GRIN3BO60391 AL354984.3-201ENST00000604803 325 ntBASIC5.22□□□□□ -1.57
GRIN3BO60391 U3.45-201ENST00000607547 219 ntBASIC5.22□□□□□ -1.57
GRIN3BO60391 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC5.22□□□□□ -1.57
GRIN3BO60391 AL133215.3-201ENST00000609801 448 ntBASIC5.22□□□□□ -1.57
GRIN3BO60391 AC006329.2-201ENST00000611491 394 ntBASIC5.22□□□□□ -1.57
GRIN3BO60391 TEX41-265ENST00000627785 704 ntTSL 5 BASIC5.22□□□□□ -1.57
GRIN3BO60391 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.22□□□□□ -1.57
GRIN3BO60391 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
GRIN3BO60391 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
GRIN3BO60391 MFF-206ENST00000392059 1710 ntTSL 5 BASIC5.22□□□□□ -1.57
GRIN3BO60391 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
GRIN3BO60391 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
GRIN3BO60391 PABPC1P7-201ENST00000413177 1513 ntBASIC5.22□□□□□ -1.57
GRIN3BO60391 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
GRIN3BO60391 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
GRIN3BO60391 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
GRIN3BO60391 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
GRIN3BO60391 PCAT14-202ENST00000627127 3935 ntBASIC5.21□□□□□ -1.57
GRIN3BO60391 AC027287.1-201ENST00000553115 1453 ntBASIC5.21□□□□□ -1.58
GRIN3BO60391 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
GRIN3BO60391 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
GRIN3BO60391 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
GRIN3BO60391 RNU1-20P-201ENST00000363314 162 ntBASIC5.21□□□□□ -1.58
GRIN3BO60391 PARD3-204ENST00000374768 799 ntTSL 3 BASIC5.21□□□□□ -1.58
GRIN3BO60391 RNU6-516P-201ENST00000411381 104 ntBASIC5.21□□□□□ -1.58
GRIN3BO60391 AC009310.1-201ENST00000414414 451 ntBASIC5.21□□□□□ -1.58
GRIN3BO60391 RPS29P4-201ENST00000414733 161 ntBASIC5.21□□□□□ -1.58
GRIN3BO60391 OR2AH1P-201ENST00000425717 928 ntBASIC5.21□□□□□ -1.58
GRIN3BO60391 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC5.21□□□□□ -1.58
GRIN3BO60391 PPIAP3-201ENST00000450588 505 ntBASIC5.21□□□□□ -1.58
GRIN3BO60391 RPS27AP1-201ENST00000475545 471 ntBASIC5.21□□□□□ -1.58
GRIN3BO60391 AL049873.1-201ENST00000480540 376 ntBASIC5.21□□□□□ -1.58
GRIN3BO60391 AC090686.1-201ENST00000481577 749 ntBASIC5.21□□□□□ -1.58
GRIN3BO60391 RN7SL293P-201ENST00000481765 281 ntBASIC5.21□□□□□ -1.58
GRIN3BO60391 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC5.21□□□□□ -1.58
GRIN3BO60391 HMGB3P16-201ENST00000508037 287 ntBASIC5.21□□□□□ -1.58
GRIN3BO60391 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC5.21□□□□□ -1.58
GRIN3BO60391 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.21□□□□□ -1.58
GRIN3BO60391 OR5B10P-201ENST00000532869 642 ntBASIC5.21□□□□□ -1.58
GRIN3BO60391 CYCSP30-201ENST00000546447 172 ntBASIC5.21□□□□□ -1.58
GRIN3BO60391 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC5.21□□□□□ -1.58
GRIN3BO60391 AC093249.1-201ENST00000567049 203 ntBASIC5.21□□□□□ -1.58
GRIN3BO60391 CYCSP40-201ENST00000575927 294 ntBASIC5.21□□□□□ -1.58
GRIN3BO60391 MIR4293-201ENST00000584305 78 ntBASIC5.21□□□□□ -1.58
GRIN3BO60391 AL512605.2-201ENST00000592972 256 ntBASIC5.21□□□□□ -1.58
GRIN3BO60391 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC5.21□□□□□ -1.58
GRIN3BO60391 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC5.21□□□□□ -1.58
GRIN3BO60391 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.21□□□□□ -1.58
GRIN3BO60391 AC011155.2-201ENST00000623202 216 ntBASIC5.21□□□□□ -1.58
GRIN3BO60391 AL136313.1-201ENST00000624804 202 ntBASIC5.21□□□□□ -1.58
GRIN3BO60391 AL133216.2-202ENST00000634512 349 ntBASIC5.21□□□□□ -1.58
GRIN3BO60391 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC5.21□□□□□ -1.58
GRIN3BO60391 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
GRIN3BO60391 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
GRIN3BO60391 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
GRIN3BO60391 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.21□□□□□ -1.58
GRIN3BO60391 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
GRIN3BO60391 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
GRIN3BO60391 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.21□□□□□ -1.58
GRIN3BO60391 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
GRIN3BO60391 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.21□□□□□ -1.58
GRIN3BO60391 AC093535.2-201ENST00000624769 2326 ntBASIC5.2□□□□□ -1.58
GRIN3BO60391 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.2□□□□□ -1.58
GRIN3BO60391 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
GRIN3BO60391 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
GRIN3BO60391 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
GRIN3BO60391 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
GRIN3BO60391 RNU4-44P-201ENST00000363050 141 ntBASIC5.2□□□□□ -1.58
GRIN3BO60391 ACEA_U3.1-201ENST00000363057 217 ntBASIC5.2□□□□□ -1.58
GRIN3BO60391 RNU6-960P-201ENST00000364056 120 ntBASIC5.2□□□□□ -1.58
GRIN3BO60391 SNORA63C-201ENST00000364578 129 ntBASIC5.2□□□□□ -1.58
GRIN3BO60391 Y_RNA.301-201ENST00000364990 103 ntBASIC5.2□□□□□ -1.58
GRIN3BO60391 RNU6-432P-201ENST00000384196 109 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms