Protein–RNA interactions for Protein: O43310

CTIF, CBP80/20-dependent translation initiation factor, humanhuman

Known RBP Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTIFO43310 MIR148B-201ENST00000362252 99 ntBASIC3.94□□□□□ -1.78
CTIFO43310 RNU6-1155P-201ENST00000363554 107 ntBASIC3.94□□□□□ -1.78
CTIFO43310 SNORA20.2-201ENST00000383922 131 ntBASIC3.94□□□□□ -1.78
CTIFO43310 RNU6-432P-201ENST00000384196 109 ntBASIC3.94□□□□□ -1.78
CTIFO43310 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CTIFO43310 RNU2-62P-201ENST00000410868 191 ntBASIC3.94□□□□□ -1.78
CTIFO43310 HSPE1P12-201ENST00000412576 301 ntBASIC3.94□□□□□ -1.78
CTIFO43310 AC011933.1-201ENST00000413334 321 ntBASIC3.94□□□□□ -1.78
CTIFO43310 AC099677.1-201ENST00000420575 175 ntBASIC3.94□□□□□ -1.78
CTIFO43310 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.94□□□□□ -1.78
CTIFO43310 AC133104.1-201ENST00000429100 218 ntBASIC3.94□□□□□ -1.78
CTIFO43310 COX6B1P7-201ENST00000430845 235 ntBASIC3.94□□□□□ -1.78
CTIFO43310 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.94□□□□□ -1.78
CTIFO43310 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.94□□□□□ -1.78
CTIFO43310 AL451074.3-201ENST00000437709 472 ntBASIC3.94□□□□□ -1.78
CTIFO43310 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.94□□□□□ -1.78
CTIFO43310 AL671855.1-201ENST00000446875 1203 ntBASIC3.94□□□□□ -1.78
CTIFO43310 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.94□□□□□ -1.78
CTIFO43310 WASF1P1-201ENST00000447560 1131 ntBASIC3.94□□□□□ -1.78
CTIFO43310 AC013267.1-201ENST00000458227 267 ntBASIC3.94□□□□□ -1.78
CTIFO43310 AC116533.1-201ENST00000459748 321 ntBASIC3.94□□□□□ -1.78
CTIFO43310 RPL38P1-201ENST00000460914 211 ntBASIC3.94□□□□□ -1.78
CTIFO43310 AP002884.2-201ENST00000471647 395 ntBASIC3.94□□□□□ -1.78
CTIFO43310 AC092989.1-201ENST00000481235 277 ntBASIC3.94□□□□□ -1.78
CTIFO43310 AC092185.1-201ENST00000491371 97 ntBASIC3.94□□□□□ -1.78
CTIFO43310 RPL21P129-201ENST00000491732 478 ntBASIC3.94□□□□□ -1.78
CTIFO43310 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.94□□□□□ -1.78
CTIFO43310 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.94□□□□□ -1.78
CTIFO43310 HMGB1P29-201ENST00000505659 499 ntBASIC3.94□□□□□ -1.78
CTIFO43310 PRDX4P1-201ENST00000507189 574 ntBASIC3.94□□□□□ -1.78
CTIFO43310 FTH1P21-201ENST00000512179 511 ntBASIC3.94□□□□□ -1.78
CTIFO43310 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.94□□□□□ -1.78
CTIFO43310 AP000857.1-201ENST00000532151 543 ntBASIC3.94□□□□□ -1.78
CTIFO43310 AC018630.1-201ENST00000541376 925 ntBASIC3.94□□□□□ -1.78
CTIFO43310 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.94□□□□□ -1.78
CTIFO43310 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.94□□□□□ -1.78
CTIFO43310 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.94□□□□□ -1.78
CTIFO43310 AP001429.1-201ENST00000602568 530 ntBASIC3.94□□□□□ -1.78
CTIFO43310 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.94□□□□□ -1.78
CTIFO43310 AC069234.5-201ENST00000611056 416 ntBASIC3.94□□□□□ -1.78
CTIFO43310 MIR6868-201ENST00000611215 58 ntBASIC3.94□□□□□ -1.78
CTIFO43310 AC245517.5-201ENST00000611529 162 ntBASIC3.94□□□□□ -1.78
CTIFO43310 uc_338.12-201ENST00000616344 181 ntBASIC3.94□□□□□ -1.78
CTIFO43310 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.94□□□□□ -1.78
CTIFO43310 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CTIFO43310 AC019226.1-201ENST00000625666 515 ntBASIC3.94□□□□□ -1.78
CTIFO43310 MIR6863-201ENST00000636112 90 ntBASIC3.94□□□□□ -1.78
CTIFO43310 LRRC77P-213ENST00000637727 880 ntBASIC3.94□□□□□ -1.78
CTIFO43310 USP8P1-201ENST00000494673 3183 ntBASIC3.94□□□□□ -1.78
CTIFO43310 PWAR6-201ENST00000552334 4618 ntBASIC3.94□□□□□ -1.78
CTIFO43310 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.94□□□□□ -1.78
CTIFO43310 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CTIFO43310 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CTIFO43310 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
CTIFO43310 RNU4-1-201ENST00000363925 141 ntBASIC3.93□□□□□ -1.78
CTIFO43310 RNU1-132P-201ENST00000364300 164 ntBASIC3.93□□□□□ -1.78
CTIFO43310 RNY3P13-201ENST00000365542 102 ntBASIC3.93□□□□□ -1.78
CTIFO43310 Y_RNA.372-201ENST00000365599 102 ntBASIC3.93□□□□□ -1.78
CTIFO43310 RPL7P60-201ENST00000397636 735 ntBASIC3.93□□□□□ -1.78
CTIFO43310 RNA5SP107-201ENST00000411358 122 ntBASIC3.93□□□□□ -1.78
CTIFO43310 USP9YP6-201ENST00000413550 854 ntBASIC3.93□□□□□ -1.78
CTIFO43310 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.93□□□□□ -1.78
CTIFO43310 ELOCP4-201ENST00000420090 333 ntBASIC3.93□□□□□ -1.78
CTIFO43310 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.93□□□□□ -1.78
CTIFO43310 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.93□□□□□ -1.78
CTIFO43310 VN1R34P-201ENST00000447387 883 ntBASIC3.93□□□□□ -1.78
CTIFO43310 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.93□□□□□ -1.78
CTIFO43310 AC006480.1-201ENST00000449887 378 ntBASIC3.93□□□□□ -1.78
CTIFO43310 AC007967.1-201ENST00000455422 1159 ntBASIC3.93□□□□□ -1.78
CTIFO43310 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.93□□□□□ -1.78
CTIFO43310 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.93□□□□□ -1.78
CTIFO43310 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.93□□□□□ -1.78
CTIFO43310 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.93□□□□□ -1.78
CTIFO43310 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.93□□□□□ -1.78
CTIFO43310 AC007224.1-201ENST00000564410 144 ntBASIC3.93□□□□□ -1.78
CTIFO43310 MIR3160-1-201ENST00000577972 85 ntBASIC3.93□□□□□ -1.78
CTIFO43310 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.93□□□□□ -1.78
CTIFO43310 SNORD84-203ENST00000584275 78 ntBASIC3.93□□□□□ -1.78
CTIFO43310 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.93□□□□□ -1.78
CTIFO43310 XIAPP1-201ENST00000603162 600 ntBASIC3.93□□□□□ -1.78
CTIFO43310 AC008277.2-201ENST00000605196 797 ntBASIC3.93□□□□□ -1.78
CTIFO43310 AC004067.1-201ENST00000608733 700 ntBASIC3.93□□□□□ -1.78
CTIFO43310 AC023043.4-201ENST00000612081 449 ntBASIC3.93□□□□□ -1.78
CTIFO43310 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.93□□□□□ -1.78
CTIFO43310 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.93□□□□□ -1.78
CTIFO43310 MIR3688-2-201ENST00000636963 87 ntBASIC3.93□□□□□ -1.78
CTIFO43310 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
CTIFO43310 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CTIFO43310 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
CTIFO43310 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CTIFO43310 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.92□□□□□ -1.78
CTIFO43310 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CTIFO43310 SNORD3H-201ENST00000384486 214 ntBASIC3.92□□□□□ -1.78
CTIFO43310 SNORA70C-201ENST00000384538 135 ntBASIC3.92□□□□□ -1.78
CTIFO43310 MIR135A2-201ENST00000384854 100 ntBASIC3.92□□□□□ -1.78
CTIFO43310 RNU6-754P-201ENST00000391166 107 ntBASIC3.92□□□□□ -1.78
CTIFO43310 CIR1P3-201ENST00000405137 479 ntBASIC3.92□□□□□ -1.78
CTIFO43310 MTHFD2P2-201ENST00000407725 247 ntBASIC3.92□□□□□ -1.78
CTIFO43310 RNU4-55P-201ENST00000410731 137 ntBASIC3.92□□□□□ -1.78
CTIFO43310 AC093578.1-201ENST00000415219 368 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 138.8 ms