Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.58□□□□□ -2
LSM1O15116 MIR325-201ENST00000385260 98 ntBASIC2.58□□□□□ -2
LSM1O15116 TAS2R15P-201ENST00000390674 928 ntBASIC2.58□□□□□ -2
LSM1O15116 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC2.58□□□□□ -2
LSM1O15116 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.58□□□□□ -2
LSM1O15116 AC099548.1-201ENST00000421443 426 ntBASIC2.58□□□□□ -2
LSM1O15116 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.58□□□□□ -2
LSM1O15116 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.58□□□□□ -2
LSM1O15116 AL512844.2-201ENST00000433990 593 ntBASIC2.58□□□□□ -2
LSM1O15116 RSL24D1P3-201ENST00000449255 495 ntBASIC2.58□□□□□ -2
LSM1O15116 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.58□□□□□ -2
LSM1O15116 AC107626.1-201ENST00000471084 183 ntBASIC2.58□□□□□ -2
LSM1O15116 RPL31P41-201ENST00000477967 372 ntBASIC2.58□□□□□ -2
LSM1O15116 MRPL42P6-201ENST00000486397 371 ntBASIC2.58□□□□□ -2
LSM1O15116 LARP1BP2-201ENST00000486594 519 ntBASIC2.58□□□□□ -2
LSM1O15116 AC092902.1-201ENST00000486999 259 ntBASIC2.58□□□□□ -2
LSM1O15116 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.58□□□□□ -2
LSM1O15116 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.58□□□□□ -2
LSM1O15116 SUB1P1-201ENST00000524415 382 ntBASIC2.58□□□□□ -2
LSM1O15116 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.58□□□□□ -2
LSM1O15116 AC124947.2-202ENST00000552735 133 ntBASIC2.58□□□□□ -2
LSM1O15116 PRELID2P1-201ENST00000552837 301 ntBASIC2.58□□□□□ -2
LSM1O15116 CYCSP39-201ENST00000565821 309 ntBASIC2.58□□□□□ -2
LSM1O15116 AC090615.1-201ENST00000577519 154 ntBASIC2.58□□□□□ -2
LSM1O15116 AL160237.3-201ENST00000604114 1013 ntBASIC2.58□□□□□ -2
LSM1O15116 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.58□□□□□ -2
LSM1O15116 AC124016.2-201ENST00000610058 665 ntBASIC2.58□□□□□ -2
LSM1O15116 AC093838.1-201ENST00000613014 469 ntBASIC2.58□□□□□ -2
LSM1O15116 AL445264.1-201ENST00000621719 171 ntBASIC2.58□□□□□ -2
LSM1O15116 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.58□□□□□ -2
LSM1O15116 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
LSM1O15116 AC005832.2-201ENST00000538921 1430 ntBASIC2.58□□□□□ -2
LSM1O15116 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
LSM1O15116 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
LSM1O15116 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
LSM1O15116 AC007336.1-201ENST00000576365 3828 ntBASIC2.57□□□□□ -2
LSM1O15116 OR4G2P-202ENST00000641004 1759 ntBASIC2.57□□□□□ -2
LSM1O15116 RNU1-105P-201ENST00000363470 161 ntBASIC2.57□□□□□ -2
LSM1O15116 RNU5E-8P-201ENST00000363502 116 ntBASIC2.57□□□□□ -2
LSM1O15116 AL138827.1-201ENST00000402666 306 ntBASIC2.57□□□□□ -2
LSM1O15116 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.57□□□□□ -2
LSM1O15116 Z75741.2-201ENST00000417272 1167 ntBASIC2.57□□□□□ -2
LSM1O15116 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC2.57□□□□□ -2
LSM1O15116 AL590383.1-201ENST00000428602 75 ntBASIC2.57□□□□□ -2
LSM1O15116 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.57□□□□□ -2
LSM1O15116 RNU6-1256P-201ENST00000516539 103 ntBASIC2.57□□□□□ -2
LSM1O15116 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.57□□□□□ -2
LSM1O15116 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.57□□□□□ -2
LSM1O15116 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.57□□□□□ -2
LSM1O15116 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.57□□□□□ -2
LSM1O15116 GLYCAM1-201ENST00000546596 285 ntBASIC2.57□□□□□ -2
LSM1O15116 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.57□□□□□ -2
LSM1O15116 MIR4325-201ENST00000583049 90 ntBASIC2.57□□□□□ -2
LSM1O15116 MIR4635-201ENST00000583759 79 ntBASIC2.57□□□□□ -2
LSM1O15116 OR1M4P-201ENST00000589199 287 ntBASIC2.57□□□□□ -2
LSM1O15116 BX664608.1-201ENST00000610519 487 ntBASIC2.57□□□□□ -2
LSM1O15116 AL137847.3-201ENST00000611521 109 ntBASIC2.57□□□□□ -2
LSM1O15116 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.57□□□□□ -2
LSM1O15116 AC004852.3-201ENST00000614131 326 ntBASIC2.57□□□□□ -2
LSM1O15116 AC034102.8-201ENST00000615146 484 ntBASIC2.57□□□□□ -2
LSM1O15116 AL590099.1-201ENST00000615276 138 ntBASIC2.57□□□□□ -2
LSM1O15116 AL357080.1-201ENST00000617394 239 ntBASIC2.57□□□□□ -2
LSM1O15116 AL512427.1-201ENST00000618593 349 ntBASIC2.57□□□□□ -2
LSM1O15116 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC2.57□□□□□ -2
LSM1O15116 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.57□□□□□ -2
LSM1O15116 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.57□□□□□ -2
LSM1O15116 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.57□□□□□ -2
LSM1O15116 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.57□□□□□ -2
LSM1O15116 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.56□□□□□ -2
LSM1O15116 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
LSM1O15116 ZNF658B-202ENST00000615961 3375 ntBASIC2.56□□□□□ -2
LSM1O15116 RNU1-112P-201ENST00000364401 164 ntBASIC2.56□□□□□ -2
LSM1O15116 Y_RNA.234-201ENST00000364409 97 ntBASIC2.56□□□□□ -2
LSM1O15116 SNORA68.1-201ENST00000364537 132 ntBASIC2.56□□□□□ -2
LSM1O15116 snoZ40.1-201ENST00000364540 72 ntBASIC2.56□□□□□ -2
LSM1O15116 RNA5SP21-201ENST00000410917 96 ntBASIC2.56□□□□□ -2
LSM1O15116 AL592148.1-201ENST00000413568 445 ntBASIC2.56□□□□□ -2
LSM1O15116 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.56□□□□□ -2
LSM1O15116 CACYBPP2-201ENST00000453625 678 ntBASIC2.56□□□□□ -2
LSM1O15116 AC092155.2-201ENST00000454675 477 ntBASIC2.56□□□□□ -2
LSM1O15116 RPL18AP17-201ENST00000455326 198 ntBASIC2.56□□□□□ -2
LSM1O15116 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.56□□□□□ -2
LSM1O15116 AL049874.1-201ENST00000489560 388 ntBASIC2.56□□□□□ -2
LSM1O15116 AC113155.1-201ENST00000511141 769 ntBASIC2.56□□□□□ -2
LSM1O15116 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.56□□□□□ -2
LSM1O15116 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.56□□□□□ -2
LSM1O15116 RNU6-583P-201ENST00000516012 92 ntBASIC2.56□□□□□ -2
LSM1O15116 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.56□□□□□ -2
LSM1O15116 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.56□□□□□ -2
LSM1O15116 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.56□□□□□ -2
LSM1O15116 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC2.56□□□□□ -2
LSM1O15116 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.56□□□□□ -2
LSM1O15116 ISCA1P3-201ENST00000577104 373 ntBASIC2.56□□□□□ -2
LSM1O15116 AC024060.1-201ENST00000607052 494 ntBASIC2.56□□□□□ -2
LSM1O15116 AC024257.5-201ENST00000612739 531 ntBASIC2.56□□□□□ -2
LSM1O15116 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
LSM1O15116 AP003399.1-201ENST00000637534 361 ntBASIC2.56□□□□□ -2
LSM1O15116 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.56□□□□□ -2
LSM1O15116 RNU6-28P-201ENST00000362378 107 ntBASIC2.55□□□□□ -2
LSM1O15116 RNU6-359P-201ENST00000365466 108 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms