Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 AC092954.1-201ENST00000609121 445 ntBASIC2.03□□□□□ -2.08
UBFD1O14562 MIR6840-201ENST00000611937 71 ntBASIC2.03□□□□□ -2.08
UBFD1O14562 MIR6132-201ENST00000622083 109 ntBASIC2.03□□□□□ -2.08
UBFD1O14562 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.03□□□□□ -2.08
UBFD1O14562 AC110994.2-201ENST00000635481 492 ntBASIC2.03□□□□□ -2.08
UBFD1O14562 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.03□□□□□ -2.08
UBFD1O14562 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
UBFD1O14562 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.02□□□□□ -2.09
UBFD1O14562 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
UBFD1O14562 AL513185.3-201ENST00000433335 1300 ntBASIC2.02□□□□□ -2.09
UBFD1O14562 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
UBFD1O14562 RNU6-582P-201ENST00000362989 107 ntBASIC2.02□□□□□ -2.09
UBFD1O14562 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
UBFD1O14562 SNORA51.6-201ENST00000384151 125 ntBASIC2.02□□□□□ -2.09
UBFD1O14562 TAS2R15P-201ENST00000390674 928 ntBASIC2.02□□□□□ -2.09
UBFD1O14562 AL024474.1-201ENST00000404655 591 ntBASIC2.02□□□□□ -2.09
UBFD1O14562 AL139156.1-201ENST00000412785 841 ntBASIC2.02□□□□□ -2.09
UBFD1O14562 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.02□□□□□ -2.09
UBFD1O14562 MTCO3P30-201ENST00000426425 670 ntBASIC2.02□□□□□ -2.09
UBFD1O14562 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.02□□□□□ -2.09
UBFD1O14562 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC2.02□□□□□ -2.09
UBFD1O14562 HMGB1P18-201ENST00000438801 619 ntBASIC2.02□□□□□ -2.09
UBFD1O14562 RPL23AP16-201ENST00000441715 421 ntBASIC2.02□□□□□ -2.09
UBFD1O14562 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
UBFD1O14562 SNORA70.16-201ENST00000516390 95 ntBASIC2.02□□□□□ -2.09
UBFD1O14562 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
UBFD1O14562 OR10V3P-201ENST00000525712 725 ntBASIC2.02□□□□□ -2.09
UBFD1O14562 AP001317.1-201ENST00000531194 960 ntBASIC2.02□□□□□ -2.09
UBFD1O14562 SNRPGP18-201ENST00000553000 214 ntBASIC2.02□□□□□ -2.09
UBFD1O14562 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC2.02□□□□□ -2.09
UBFD1O14562 AL731537.2-201ENST00000561565 951 ntBASIC2.02□□□□□ -2.09
UBFD1O14562 MIR1273D-201ENST00000577266 86 ntBASIC2.02□□□□□ -2.09
UBFD1O14562 OR4K7P-201ENST00000580232 945 ntBASIC2.02□□□□□ -2.09
UBFD1O14562 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
UBFD1O14562 U73023.1-201ENST00000603134 700 ntBASIC2.02□□□□□ -2.09
UBFD1O14562 AC055876.5-201ENST00000605667 259 ntBASIC2.02□□□□□ -2.09
UBFD1O14562 AC025754.2-201ENST00000606491 432 ntBASIC2.02□□□□□ -2.09
UBFD1O14562 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.02□□□□□ -2.09
UBFD1O14562 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.02□□□□□ -2.09
UBFD1O14562 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.02□□□□□ -2.09
UBFD1O14562 AC079597.1-201ENST00000624306 508 ntBASIC2.02□□□□□ -2.09
UBFD1O14562 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
UBFD1O14562 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.02□□□□□ -2.09
UBFD1O14562 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC2.01□□□□□ -2.09
UBFD1O14562 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.01□□□□□ -2.09
UBFD1O14562 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
UBFD1O14562 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
UBFD1O14562 RNU6-251P-201ENST00000363235 104 ntBASIC2.01□□□□□ -2.09
UBFD1O14562 RNU6-115P-201ENST00000364310 107 ntBASIC2.01□□□□□ -2.09
UBFD1O14562 RNA5SP139-201ENST00000364340 117 ntBASIC2.01□□□□□ -2.09
UBFD1O14562 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
UBFD1O14562 AL121978.1-201ENST00000402778 359 ntBASIC2.01□□□□□ -2.09
UBFD1O14562 AL139098.1-201ENST00000407291 389 ntBASIC2.01□□□□□ -2.09
UBFD1O14562 MTND3P20-201ENST00000407663 186 ntBASIC2.01□□□□□ -2.09
UBFD1O14562 RNU6-575P-201ENST00000411326 105 ntBASIC2.01□□□□□ -2.09
UBFD1O14562 AL136133.1-201ENST00000413694 376 ntBASIC2.01□□□□□ -2.09
UBFD1O14562 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.01□□□□□ -2.09
UBFD1O14562 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.01□□□□□ -2.09
UBFD1O14562 RPL7P37-201ENST00000425095 738 ntBASIC2.01□□□□□ -2.09
UBFD1O14562 AL591806.2-201ENST00000433122 173 ntBASIC2.01□□□□□ -2.09
UBFD1O14562 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.01□□□□□ -2.09
UBFD1O14562 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC2.01□□□□□ -2.09
UBFD1O14562 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.01□□□□□ -2.09
UBFD1O14562 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC2.01□□□□□ -2.09
UBFD1O14562 DPPA3P1-201ENST00000448050 469 ntBASIC2.01□□□□□ -2.09
UBFD1O14562 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.01□□□□□ -2.09
UBFD1O14562 SNRPGP6-201ENST00000451124 220 ntBASIC2.01□□□□□ -2.09
UBFD1O14562 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.01□□□□□ -2.09
UBFD1O14562 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.01□□□□□ -2.09
UBFD1O14562 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.01□□□□□ -2.09
UBFD1O14562 AC048346.1-201ENST00000510247 144 ntBASIC2.01□□□□□ -2.09
UBFD1O14562 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.01□□□□□ -2.09
UBFD1O14562 RNU1-40P-201ENST00000516816 164 ntBASIC2.01□□□□□ -2.09
UBFD1O14562 RNU1-97P-201ENST00000516872 164 ntBASIC2.01□□□□□ -2.09
UBFD1O14562 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
UBFD1O14562 AC008739.2-201ENST00000597006 317 ntBASIC2.01□□□□□ -2.09
UBFD1O14562 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.01□□□□□ -2.09
UBFD1O14562 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.01□□□□□ -2.09
UBFD1O14562 AL590396.4-201ENST00000636779 956 ntBASIC2.01□□□□□ -2.09
UBFD1O14562 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
UBFD1O14562 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
UBFD1O14562 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2□□□□□ -2.09
UBFD1O14562 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
UBFD1O14562 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
UBFD1O14562 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC2□□□□□ -2.09
UBFD1O14562 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2□□□□□ -2.09
UBFD1O14562 RNU6-353P-201ENST00000364266 108 ntBASIC2□□□□□ -2.09
UBFD1O14562 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
UBFD1O14562 AL136372.1-201ENST00000403060 228 ntBASIC2□□□□□ -2.09
UBFD1O14562 AL023284.1-201ENST00000403956 276 ntBASIC2□□□□□ -2.09
UBFD1O14562 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2□□□□□ -2.09
UBFD1O14562 AC234064.1-201ENST00000436312 247 ntBASIC2□□□□□ -2.09
UBFD1O14562 PGBD4P3-201ENST00000440731 581 ntBASIC2□□□□□ -2.09
UBFD1O14562 AC096638.1-201ENST00000444678 216 ntBASIC2□□□□□ -2.09
UBFD1O14562 AL050341.1-201ENST00000447743 313 ntBASIC2□□□□□ -2.09
UBFD1O14562 RPL30P9-201ENST00000465586 330 ntBASIC2□□□□□ -2.09
UBFD1O14562 XACT-201ENST00000468762 497 ntTSL 5 BASIC2□□□□□ -2.09
UBFD1O14562 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2□□□□□ -2.09
UBFD1O14562 AC079804.2-201ENST00000490376 200 ntBASIC2□□□□□ -2.09
UBFD1O14562 AC114322.1-201ENST00000506771 926 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 201.8 ms