Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AL157817.1-201ENST00000614264 790 ntBASIC2.91□□□□□ -1.94
PDLIM1O00151 AC009464.1-201ENST00000615731 469 ntBASIC2.91□□□□□ -1.94
PDLIM1O00151 AC008443.7-201ENST00000622195 246 ntBASIC2.91□□□□□ -1.94
PDLIM1O00151 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.91□□□□□ -1.94
PDLIM1O00151 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
PDLIM1O00151 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
PDLIM1O00151 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.91□□□□□ -1.94
PDLIM1O00151 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
PDLIM1O00151 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
PDLIM1O00151 AC087359.1-201ENST00000508335 1740 ntBASIC2.9□□□□□ -1.94
PDLIM1O00151 MTND5P1-201ENST00000445440 1375 ntBASIC2.9□□□□□ -1.94
PDLIM1O00151 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
PDLIM1O00151 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.9□□□□□ -1.95
PDLIM1O00151 RPL21P132-201ENST00000331267 462 ntBASIC2.9□□□□□ -1.95
PDLIM1O00151 SNORA14A-201ENST00000364773 135 ntBASIC2.9□□□□□ -1.95
PDLIM1O00151 RNU6-1027P-201ENST00000383998 107 ntBASIC2.9□□□□□ -1.95
PDLIM1O00151 RNU6-1200P-201ENST00000384162 107 ntBASIC2.9□□□□□ -1.95
PDLIM1O00151 Y_RNA.548-201ENST00000384656 105 ntBASIC2.9□□□□□ -1.95
PDLIM1O00151 AC110754.1-201ENST00000399740 601 ntBASIC2.9□□□□□ -1.95
PDLIM1O00151 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC2.9□□□□□ -1.95
PDLIM1O00151 RNA5SP38-201ENST00000410750 119 ntBASIC2.9□□□□□ -1.95
PDLIM1O00151 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC2.9□□□□□ -1.95
PDLIM1O00151 AL022400.1-201ENST00000423946 935 ntBASIC2.9□□□□□ -1.95
PDLIM1O00151 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.9□□□□□ -1.95
PDLIM1O00151 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.9□□□□□ -1.95
PDLIM1O00151 AC006946.1-201ENST00000429106 328 ntBASIC2.9□□□□□ -1.95
PDLIM1O00151 AL592447.1-201ENST00000447592 540 ntBASIC2.9□□□□□ -1.95
PDLIM1O00151 AL590664.1-201ENST00000448065 339 ntBASIC2.9□□□□□ -1.95
PDLIM1O00151 MTCO1P27-201ENST00000448269 226 ntBASIC2.9□□□□□ -1.95
PDLIM1O00151 RN7SL807P-201ENST00000470923 297 ntBASIC2.9□□□□□ -1.95
PDLIM1O00151 MTND2P14-201ENST00000482139 351 ntBASIC2.9□□□□□ -1.95
PDLIM1O00151 AC103975.1-201ENST00000482506 483 ntBASIC2.9□□□□□ -1.95
PDLIM1O00151 AC021382.1-201ENST00000483523 359 ntBASIC2.9□□□□□ -1.95
PDLIM1O00151 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.9□□□□□ -1.95
PDLIM1O00151 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.9□□□□□ -1.95
PDLIM1O00151 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.9□□□□□ -1.95
PDLIM1O00151 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.9□□□□□ -1.95
PDLIM1O00151 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC2.9□□□□□ -1.95
PDLIM1O00151 AC022483.1-201ENST00000514020 567 ntBASIC2.9□□□□□ -1.95
PDLIM1O00151 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.9□□□□□ -1.95
PDLIM1O00151 ELOCP32-201ENST00000548625 324 ntBASIC2.9□□□□□ -1.95
PDLIM1O00151 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.9□□□□□ -1.95
PDLIM1O00151 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.9□□□□□ -1.95
PDLIM1O00151 AC090888.2-201ENST00000559765 1144 ntBASIC2.9□□□□□ -1.95
PDLIM1O00151 MIR2682-201ENST00000580305 110 ntBASIC2.9□□□□□ -1.95
PDLIM1O00151 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.9□□□□□ -1.95
PDLIM1O00151 MIR4999-201ENST00000585029 91 ntBASIC2.9□□□□□ -1.95
PDLIM1O00151 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.9□□□□□ -1.95
PDLIM1O00151 VN1R92P-201ENST00000598511 928 ntBASIC2.9□□□□□ -1.95
PDLIM1O00151 YPEL5P2-201ENST00000605553 359 ntBASIC2.9□□□□□ -1.95
PDLIM1O00151 AC072039.2-201ENST00000608883 439 ntBASIC2.9□□□□□ -1.95
PDLIM1O00151 AL450472.3-201ENST00000615578 367 ntBASIC2.9□□□□□ -1.95
PDLIM1O00151 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.9□□□□□ -1.95
PDLIM1O00151 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
PDLIM1O00151 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.9□□□□□ -1.95
PDLIM1O00151 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.9□□□□□ -1.95
PDLIM1O00151 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
PDLIM1O00151 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
PDLIM1O00151 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
PDLIM1O00151 AC092447.10-201ENST00000620607 1652 ntBASIC2.89□□□□□ -1.95
PDLIM1O00151 AC009812.4-201ENST00000569134 1805 ntBASIC2.89□□□□□ -1.95
PDLIM1O00151 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.89□□□□□ -1.95
PDLIM1O00151 RNU6-853P-201ENST00000364306 107 ntBASIC2.89□□□□□ -1.95
PDLIM1O00151 RNU6-1078P-201ENST00000364522 103 ntBASIC2.89□□□□□ -1.95
PDLIM1O00151 RNU6-359P-201ENST00000365466 108 ntBASIC2.89□□□□□ -1.95
PDLIM1O00151 RNA5SP88-201ENST00000365560 109 ntBASIC2.89□□□□□ -1.95
PDLIM1O00151 RPS3AP24-201ENST00000407896 734 ntBASIC2.89□□□□□ -1.95
PDLIM1O00151 MTCO1P17-201ENST00000411522 491 ntBASIC2.89□□□□□ -1.95
PDLIM1O00151 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.89□□□□□ -1.95
PDLIM1O00151 AC009487.2-201ENST00000420969 6821 ntBASIC2.89□□□□□ -1.95
PDLIM1O00151 SUMO1P4-201ENST00000429430 302 ntBASIC2.89□□□□□ -1.95
PDLIM1O00151 CR769767.1-201ENST00000436337 346 ntBASIC2.89□□□□□ -1.95
PDLIM1O00151 UBE2V1P13-201ENST00000436983 439 ntBASIC2.89□□□□□ -1.95
PDLIM1O00151 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.89□□□□□ -1.95
PDLIM1O00151 AL591503.2-201ENST00000442314 1005 ntBASIC2.89□□□□□ -1.95
PDLIM1O00151 AC112653.1-201ENST00000443851 386 ntBASIC2.89□□□□□ -1.95
PDLIM1O00151 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.89□□□□□ -1.95
PDLIM1O00151 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.89□□□□□ -1.95
PDLIM1O00151 AC104978.1-201ENST00000449387 391 ntBASIC2.89□□□□□ -1.95
PDLIM1O00151 SNORD121B-201ENST00000458838 81 ntBASIC2.89□□□□□ -1.95
PDLIM1O00151 RN7SL20P-201ENST00000488827 297 ntBASIC2.89□□□□□ -1.95
PDLIM1O00151 AC110794.1-201ENST00000505816 425 ntBASIC2.89□□□□□ -1.95
PDLIM1O00151 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.89□□□□□ -1.95
PDLIM1O00151 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.89□□□□□ -1.95
PDLIM1O00151 AC026801.2-201ENST00000515352 425 ntBASIC2.89□□□□□ -1.95
PDLIM1O00151 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.89□□□□□ -1.95
PDLIM1O00151 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.89□□□□□ -1.95
PDLIM1O00151 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.89□□□□□ -1.95
PDLIM1O00151 DNAJC8P1-201ENST00000554535 372 ntBASIC2.89□□□□□ -1.95
PDLIM1O00151 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.89□□□□□ -1.95
PDLIM1O00151 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.89□□□□□ -1.95
PDLIM1O00151 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.89□□□□□ -1.95
PDLIM1O00151 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC2.89□□□□□ -1.95
PDLIM1O00151 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.89□□□□□ -1.95
PDLIM1O00151 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.89□□□□□ -1.95
PDLIM1O00151 AC096577.2-201ENST00000611455 153 ntBASIC2.89□□□□□ -1.95
PDLIM1O00151 MIR7112-201ENST00000616126 65 ntBASIC2.89□□□□□ -1.95
PDLIM1O00151 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.89□□□□□ -1.95
PDLIM1O00151 AC011460.1-201ENST00000636268 1834 ntBASIC2.89□□□□□ -1.95
PDLIM1O00151 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 165.3 ms