Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 AL163051.2-201ENST00000618976 735 ntBASIC1.52□□□□□ -2.17
COL6A6A6NMZ7 AC006065.5-201ENST00000623427 349 ntBASIC1.52□□□□□ -2.17
COL6A6A6NMZ7 MTND4P31-201ENST00000425607 1343 ntBASIC1.52□□□□□ -2.17
COL6A6A6NMZ7 ENSAP3-201ENST00000312710 333 ntBASIC1.51□□□□□ -2.17
COL6A6A6NMZ7 MIR525-201ENST00000384978 85 ntBASIC1.51□□□□□ -2.17
COL6A6A6NMZ7 UBE2V1P9-201ENST00000414760 368 ntBASIC1.51□□□□□ -2.17
COL6A6A6NMZ7 CR848007.2-201ENST00000424918 787 ntBASIC1.51□□□□□ -2.17
COL6A6A6NMZ7 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC1.51□□□□□ -2.17
COL6A6A6NMZ7 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC1.51□□□□□ -2.17
COL6A6A6NMZ7 AC007000.2-201ENST00000442564 487 ntBASIC1.51□□□□□ -2.17
COL6A6A6NMZ7 AC008628.1-201ENST00000508663 265 ntBASIC1.51□□□□□ -2.17
COL6A6A6NMZ7 AC133963.2-201ENST00000513686 578 ntBASIC1.51□□□□□ -2.17
COL6A6A6NMZ7 RNU6-1223P-201ENST00000517124 104 ntBASIC1.51□□□□□ -2.17
COL6A6A6NMZ7 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.51□□□□□ -2.17
COL6A6A6NMZ7 OR4G1P-201ENST00000588632 938 ntBASIC1.51□□□□□ -2.17
COL6A6A6NMZ7 STMN1P1-201ENST00000617809 440 ntBASIC1.51□□□□□ -2.17
COL6A6A6NMZ7 MIR4496-201ENST00000635896 61 ntBASIC1.51□□□□□ -2.17
COL6A6A6NMZ7 AC091948.2-201ENST00000636510 279 ntBASIC1.51□□□□□ -2.17
COL6A6A6NMZ7 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
COL6A6A6NMZ7 U8.9-201ENST00000365667 134 ntBASIC1.51□□□□□ -2.17
COL6A6A6NMZ7 HMGB3P31-201ENST00000413333 595 ntBASIC1.51□□□□□ -2.17
COL6A6A6NMZ7 ZNF736P7Y-201ENST00000425158 820 ntBASIC1.51□□□□□ -2.17
COL6A6A6NMZ7 RPL17P35-201ENST00000432217 549 ntBASIC1.51□□□□□ -2.17
COL6A6A6NMZ7 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC1.51□□□□□ -2.17
COL6A6A6NMZ7 AC092155.2-201ENST00000454675 477 ntBASIC1.51□□□□□ -2.17
COL6A6A6NMZ7 MTND2P30-201ENST00000456663 382 ntBASIC1.51□□□□□ -2.17
COL6A6A6NMZ7 RPL7P5-201ENST00000471472 736 ntBASIC1.51□□□□□ -2.17
COL6A6A6NMZ7 AP003168.1-201ENST00000530091 307 ntBASIC1.51□□□□□ -2.17
COL6A6A6NMZ7 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC1.51□□□□□ -2.17
COL6A6A6NMZ7 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.51□□□□□ -2.17
COL6A6A6NMZ7 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.51□□□□□ -2.17
COL6A6A6NMZ7 AP000787.2-201ENST00000604432 568 ntBASIC1.51□□□□□ -2.17
COL6A6A6NMZ7 AC110792.4-201ENST00000609843 298 ntBASIC1.51□□□□□ -2.17
COL6A6A6NMZ7 AC012150.2-201ENST00000621300 544 ntBASIC1.51□□□□□ -2.17
COL6A6A6NMZ7 CKAP2P1-201ENST00000555477 2049 ntBASIC1.5□□□□□ -2.17
COL6A6A6NMZ7 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC1.5□□□□□ -2.17
COL6A6A6NMZ7 MIR591-201ENST00000385290 95 ntBASIC1.5□□□□□ -2.17
COL6A6A6NMZ7 MTATP6P31-201ENST00000406985 692 ntBASIC1.5□□□□□ -2.17
COL6A6A6NMZ7 MTCO1P43-201ENST00000431831 488 ntBASIC1.5□□□□□ -2.17
COL6A6A6NMZ7 AC104435.1-201ENST00000483483 166 ntBASIC1.5□□□□□ -2.17
COL6A6A6NMZ7 RPS15AP36-201ENST00000492022 382 ntBASIC1.5□□□□□ -2.17
COL6A6A6NMZ7 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC1.5□□□□□ -2.17
COL6A6A6NMZ7 RNU2-58P-201ENST00000516403 183 ntBASIC1.5□□□□□ -2.17
COL6A6A6NMZ7 CASP1-212ENST00000531166 300 ntTSL 5 BASIC1.5□□□□□ -2.17
COL6A6A6NMZ7 AP003117.1-201ENST00000602771 554 ntBASIC1.5□□□□□ -2.17
COL6A6A6NMZ7 AC018618.2-201ENST00000604770 446 ntBASIC1.5□□□□□ -2.17
COL6A6A6NMZ7 AC112503.2-201ENST00000609005 552 ntBASIC1.5□□□□□ -2.17
COL6A6A6NMZ7 AC092954.1-201ENST00000609121 445 ntBASIC1.5□□□□□ -2.17
COL6A6A6NMZ7 RMST_6.1-201ENST00000611980 203 ntBASIC1.5□□□□□ -2.17
COL6A6A6NMZ7 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC1.5□□□□□ -2.17
COL6A6A6NMZ7 AC138649.5-201ENST00000637456 137 ntBASIC1.5□□□□□ -2.17
COL6A6A6NMZ7 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
COL6A6A6NMZ7 RNA5SP37-201ENST00000365420 130 ntBASIC1.5□□□□□ -2.17
COL6A6A6NMZ7 MIR517C-201ENST00000385103 95 ntBASIC1.5□□□□□ -2.17
COL6A6A6NMZ7 RNU1-101P-201ENST00000391171 127 ntBASIC1.5□□□□□ -2.17
COL6A6A6NMZ7 U3.37-201ENST00000408528 213 ntBASIC1.5□□□□□ -2.17
COL6A6A6NMZ7 HMGN2P35-201ENST00000412164 270 ntBASIC1.5□□□□□ -2.17
COL6A6A6NMZ7 USP9YP27-201ENST00000418455 438 ntBASIC1.5□□□□□ -2.17
COL6A6A6NMZ7 PAICSP7-201ENST00000419829 962 ntBASIC1.5□□□□□ -2.17
COL6A6A6NMZ7 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
COL6A6A6NMZ7 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.5□□□□□ -2.17
COL6A6A6NMZ7 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC1.5□□□□□ -2.17
COL6A6A6NMZ7 RPL21P2-201ENST00000440049 481 ntBASIC1.5□□□□□ -2.17
COL6A6A6NMZ7 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC1.5□□□□□ -2.17
COL6A6A6NMZ7 AL513343.1-201ENST00000451818 792 ntBASIC1.5□□□□□ -2.17
COL6A6A6NMZ7 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.5□□□□□ -2.17
COL6A6A6NMZ7 snoU13.7-201ENST00000459220 104 ntBASIC1.5□□□□□ -2.17
COL6A6A6NMZ7 AC089999.1-201ENST00000460336 374 ntBASIC1.5□□□□□ -2.17
COL6A6A6NMZ7 AC146507.1-201ENST00000468335 354 ntBASIC1.5□□□□□ -2.17
COL6A6A6NMZ7 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC1.5□□□□□ -2.17
COL6A6A6NMZ7 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC1.5□□□□□ -2.17
COL6A6A6NMZ7 RNU6-362P-201ENST00000516736 90 ntBASIC1.5□□□□□ -2.17
COL6A6A6NMZ7 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.5□□□□□ -2.17
COL6A6A6NMZ7 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC1.5□□□□□ -2.17
COL6A6A6NMZ7 AC104229.1-201ENST00000561364 255 ntBASIC1.5□□□□□ -2.17
COL6A6A6NMZ7 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC1.5□□□□□ -2.17
COL6A6A6NMZ7 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.5□□□□□ -2.17
COL6A6A6NMZ7 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC1.5□□□□□ -2.17
COL6A6A6NMZ7 AC139769.3-201ENST00000618383 175 ntBASIC1.5□□□□□ -2.17
COL6A6A6NMZ7 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
COL6A6A6NMZ7 UBE2L2-201ENST00000254302 429 ntBASIC1.49□□□□□ -2.17
COL6A6A6NMZ7 Y_RNA.178-201ENST00000363832 102 ntBASIC1.49□□□□□ -2.17
COL6A6A6NMZ7 RNU4-51P-201ENST00000364206 140 ntBASIC1.49□□□□□ -2.17
COL6A6A6NMZ7 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
COL6A6A6NMZ7 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC1.49□□□□□ -2.17
COL6A6A6NMZ7 TPMTP3-201ENST00000411928 735 ntBASIC1.49□□□□□ -2.17
COL6A6A6NMZ7 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC1.49□□□□□ -2.17
COL6A6A6NMZ7 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.49□□□□□ -2.17
COL6A6A6NMZ7 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC1.49□□□□□ -2.17
COL6A6A6NMZ7 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC1.49□□□□□ -2.17
COL6A6A6NMZ7 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC1.49□□□□□ -2.17
COL6A6A6NMZ7 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
COL6A6A6NMZ7 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC1.49□□□□□ -2.17
COL6A6A6NMZ7 RN7SL274P-201ENST00000492268 272 ntBASIC1.49□□□□□ -2.17
COL6A6A6NMZ7 AC090255.1-201ENST00000495779 349 ntBASIC1.49□□□□□ -2.17
COL6A6A6NMZ7 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC1.49□□□□□ -2.17
COL6A6A6NMZ7 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC1.49□□□□□ -2.17
COL6A6A6NMZ7 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.49□□□□□ -2.17
COL6A6A6NMZ7 OR5H4P-201ENST00000510851 923 ntBASIC1.49□□□□□ -2.17
COL6A6A6NMZ7 SNORA31.26-201ENST00000517250 137 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms