Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC0.93□□□□□ -2.26
LINC01549A6NIU2 AC009414.1-201ENST00000427200 443 ntBASIC0.93□□□□□ -2.26
LINC01549A6NIU2 HMGB1P31-201ENST00000437242 427 ntBASIC0.93□□□□□ -2.26
LINC01549A6NIU2 ELOCP3-201ENST00000439303 348 ntBASIC0.93□□□□□ -2.26
LINC01549A6NIU2 MTCYBP34-201ENST00000439552 670 ntBASIC0.93□□□□□ -2.26
LINC01549A6NIU2 WASF1P1-201ENST00000447560 1131 ntBASIC0.93□□□□□ -2.26
LINC01549A6NIU2 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC0.93□□□□□ -2.26
LINC01549A6NIU2 KLF3P2-201ENST00000465138 268 ntBASIC0.93□□□□□ -2.26
LINC01549A6NIU2 AC023141.11-201ENST00000508864 202 ntBASIC0.93□□□□□ -2.26
LINC01549A6NIU2 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC0.93□□□□□ -2.26
LINC01549A6NIU2 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC0.93□□□□□ -2.26
LINC01549A6NIU2 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC0.93□□□□□ -2.26
LINC01549A6NIU2 LINC00933-203ENST00000559812 219 ntBASIC0.93□□□□□ -2.26
LINC01549A6NIU2 FAM60BP-201ENST00000578364 658 ntBASIC0.93□□□□□ -2.26
LINC01549A6NIU2 HSPE1P7-201ENST00000604681 321 ntBASIC0.93□□□□□ -2.26
LINC01549A6NIU2 AL050343.2-201ENST00000607338 280 ntBASIC0.93□□□□□ -2.26
LINC01549A6NIU2 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC0.93□□□□□ -2.26
LINC01549A6NIU2 BX649567.1-201ENST00000642071 1134 ntBASIC0.93□□□□□ -2.26
LINC01549A6NIU2 ZNF72P-201ENST00000425869 1908 ntBASIC0.93□□□□□ -2.26
LINC01549A6NIU2 ZNF37BP-203ENST00000452306 1352 ntBASIC0.93□□□□□ -2.26
LINC01549A6NIU2 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
LINC01549A6NIU2 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC0.92□□□□□ -2.26
LINC01549A6NIU2 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
LINC01549A6NIU2 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
LINC01549A6NIU2 U3.20-201ENST00000390909 217 ntBASIC0.92□□□□□ -2.26
LINC01549A6NIU2 MIR934-201ENST00000401241 83 ntBASIC0.92□□□□□ -2.26
LINC01549A6NIU2 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
LINC01549A6NIU2 OR51AB1P-201ENST00000429046 620 ntBASIC0.92□□□□□ -2.26
LINC01549A6NIU2 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC0.92□□□□□ -2.26
LINC01549A6NIU2 HMGN2P3-201ENST00000433603 273 ntBASIC0.92□□□□□ -2.26
LINC01549A6NIU2 HMGN2P5-201ENST00000436882 273 ntBASIC0.92□□□□□ -2.26
LINC01549A6NIU2 AL513321.1-201ENST00000441175 761 ntBASIC0.92□□□□□ -2.26
LINC01549A6NIU2 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC0.92□□□□□ -2.26
LINC01549A6NIU2 BX276092.4-201ENST00000452056 248 ntBASIC0.92□□□□□ -2.26
LINC01549A6NIU2 AC010099.1-201ENST00000455434 375 ntBASIC0.92□□□□□ -2.26
LINC01549A6NIU2 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC0.92□□□□□ -2.26
LINC01549A6NIU2 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC0.92□□□□□ -2.26
LINC01549A6NIU2 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC0.92□□□□□ -2.26
LINC01549A6NIU2 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
LINC01549A6NIU2 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC0.92□□□□□ -2.26
LINC01549A6NIU2 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC0.92□□□□□ -2.26
LINC01549A6NIU2 CYCSP2-201ENST00000558168 301 ntBASIC0.92□□□□□ -2.26
LINC01549A6NIU2 AC068338.1-201ENST00000565567 176 ntBASIC0.92□□□□□ -2.26
LINC01549A6NIU2 MIR4435-1-201ENST00000582552 80 ntBASIC0.92□□□□□ -2.26
LINC01549A6NIU2 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC0.92□□□□□ -2.26
LINC01549A6NIU2 AC245389.2-201ENST00000616023 576 ntBASIC0.92□□□□□ -2.26
LINC01549A6NIU2 AC242843.1-201ENST00000618702 573 ntBASIC0.92□□□□□ -2.26
LINC01549A6NIU2 AC095031.1-201ENST00000623685 672 ntBASIC0.92□□□□□ -2.26
LINC01549A6NIU2 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC0.92□□□□□ -2.26
LINC01549A6NIU2 AC087821.2-201ENST00000637086 450 ntBASIC0.92□□□□□ -2.26
LINC01549A6NIU2 FAM157B-203ENST00000639350 358 ntBASIC0.92□□□□□ -2.26
LINC01549A6NIU2 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC0.92□□□□□ -2.26
LINC01549A6NIU2 SNORA67.5-201ENST00000391036 107 ntBASIC0.91□□□□□ -2.26
LINC01549A6NIU2 RNA5SP354-201ENST00000391247 136 ntBASIC0.91□□□□□ -2.26
LINC01549A6NIU2 AL627390.1-201ENST00000396055 340 ntBASIC0.91□□□□□ -2.26
LINC01549A6NIU2 RPS3AP24-201ENST00000407896 734 ntBASIC0.91□□□□□ -2.26
LINC01549A6NIU2 SNORA11B-201ENST00000408175 129 ntBASIC0.91□□□□□ -2.26
LINC01549A6NIU2 SNORA3.2-201ENST00000408221 125 ntBASIC0.91□□□□□ -2.26
LINC01549A6NIU2 EIF4EP4-201ENST00000424916 578 ntBASIC0.91□□□□□ -2.26
LINC01549A6NIU2 USP12PX-201ENST00000432383 1057 ntBASIC0.91□□□□□ -2.26
LINC01549A6NIU2 Z85994.2-201ENST00000434327 452 ntBASIC0.91□□□□□ -2.26
LINC01549A6NIU2 UBE2D3P1-201ENST00000436669 444 ntBASIC0.91□□□□□ -2.26
LINC01549A6NIU2 RPL12P25-201ENST00000455592 494 ntBASIC0.91□□□□□ -2.26
LINC01549A6NIU2 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC0.91□□□□□ -2.26
LINC01549A6NIU2 AC068587.2-201ENST00000478386 781 ntBASIC0.91□□□□□ -2.26
LINC01549A6NIU2 AC107032.1-201ENST00000485945 480 ntBASIC0.91□□□□□ -2.26
LINC01549A6NIU2 AC004062.1-201ENST00000509926 645 ntBASIC0.91□□□□□ -2.26
LINC01549A6NIU2 AC008834.1-201ENST00000511612 175 ntBASIC0.91□□□□□ -2.26
LINC01549A6NIU2 snoZ278.1-201ENST00000517059 112 ntBASIC0.91□□□□□ -2.26
LINC01549A6NIU2 AP002812.4-201ENST00000532139 286 ntBASIC0.91□□□□□ -2.26
LINC01549A6NIU2 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC0.91□□□□□ -2.26
LINC01549A6NIU2 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC0.91□□□□□ -2.26
LINC01549A6NIU2 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC0.91□□□□□ -2.26
LINC01549A6NIU2 MTCYBP28-201ENST00000566728 1132 ntBASIC0.91□□□□□ -2.26
LINC01549A6NIU2 ATP5F1P7-201ENST00000567330 760 ntBASIC0.91□□□□□ -2.26
LINC01549A6NIU2 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC0.91□□□□□ -2.26
LINC01549A6NIU2 AC024619.4-201ENST00000580924 316 ntBASIC0.91□□□□□ -2.26
LINC01549A6NIU2 AP005137.2-201ENST00000609238 400 ntBASIC0.91□□□□□ -2.26
LINC01549A6NIU2 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC0.91□□□□□ -2.26
LINC01549A6NIU2 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
LINC01549A6NIU2 ZNF702P-202ENST00000434269 1966 ntBASIC0.9□□□□□ -2.26
LINC01549A6NIU2 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
LINC01549A6NIU2 FABP12P1-201ENST00000401911 322 ntBASIC0.9□□□□□ -2.27
LINC01549A6NIU2 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC0.9□□□□□ -2.27
LINC01549A6NIU2 AL591704.2-201ENST00000421658 181 ntBASIC0.9□□□□□ -2.27
LINC01549A6NIU2 AL358453.1-201ENST00000422522 250 ntBASIC0.9□□□□□ -2.27
LINC01549A6NIU2 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC0.9□□□□□ -2.27
LINC01549A6NIU2 SNORD97-201ENST00000459187 142 ntBASIC0.9□□□□□ -2.27
LINC01549A6NIU2 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC0.9□□□□□ -2.27
LINC01549A6NIU2 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC0.9□□□□□ -2.27
LINC01549A6NIU2 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC0.9□□□□□ -2.27
LINC01549A6NIU2 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC0.9□□□□□ -2.27
LINC01549A6NIU2 AC090821.2-201ENST00000523552 176 ntBASIC0.9□□□□□ -2.27
LINC01549A6NIU2 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC0.9□□□□□ -2.27
LINC01549A6NIU2 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC0.9□□□□□ -2.27
LINC01549A6NIU2 AC023813.2-201ENST00000564321 469 ntBASIC0.9□□□□□ -2.27
LINC01549A6NIU2 MIR4529-201ENST00000578110 78 ntBASIC0.9□□□□□ -2.27
LINC01549A6NIU2 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC0.9□□□□□ -2.27
LINC01549A6NIU2 AL392112.1-201ENST00000605115 829 ntBASIC0.9□□□□□ -2.27
LINC01549A6NIU2 PRR13P7-201ENST00000605538 430 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 135.7 ms