Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SMIM28A0A1B0GU29 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.79□□□□□ -1.96
SMIM28A0A1B0GU29 AC011477.1-204ENST00000623416 1325 ntBASIC2.79□□□□□ -1.96
SMIM28A0A1B0GU29 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SMIM28A0A1B0GU29 FAM133CP-201ENST00000332869 704 ntBASIC2.79□□□□□ -1.96
SMIM28A0A1B0GU29 PIGPP2-201ENST00000411569 458 ntBASIC2.79□□□□□ -1.96
SMIM28A0A1B0GU29 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.79□□□□□ -1.96
SMIM28A0A1B0GU29 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.79□□□□□ -1.96
SMIM28A0A1B0GU29 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC2.79□□□□□ -1.96
SMIM28A0A1B0GU29 ZYG11AP1-201ENST00000430329 837 ntBASIC2.79□□□□□ -1.96
SMIM28A0A1B0GU29 MUPP-201ENST00000438111 566 ntBASIC2.79□□□□□ -1.96
SMIM28A0A1B0GU29 AL117351.1-201ENST00000438864 766 ntBASIC2.79□□□□□ -1.96
SMIM28A0A1B0GU29 SDCBPP1-201ENST00000440192 890 ntBASIC2.79□□□□□ -1.96
SMIM28A0A1B0GU29 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.79□□□□□ -1.96
SMIM28A0A1B0GU29 Z73417.1-201ENST00000447373 778 ntBASIC2.79□□□□□ -1.96
SMIM28A0A1B0GU29 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.79□□□□□ -1.96
SMIM28A0A1B0GU29 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.79□□□□□ -1.96
SMIM28A0A1B0GU29 RPS23P3-201ENST00000470993 430 ntBASIC2.79□□□□□ -1.96
SMIM28A0A1B0GU29 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.79□□□□□ -1.96
SMIM28A0A1B0GU29 KLHL2P1-201ENST00000508691 521 ntBASIC2.79□□□□□ -1.96
SMIM28A0A1B0GU29 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.79□□□□□ -1.96
SMIM28A0A1B0GU29 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.79□□□□□ -1.96
SMIM28A0A1B0GU29 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.79□□□□□ -1.96
SMIM28A0A1B0GU29 UBTFL10-201ENST00000528532 562 ntBASIC2.79□□□□□ -1.96
SMIM28A0A1B0GU29 OR6C7P-201ENST00000547875 934 ntBASIC2.79□□□□□ -1.96
SMIM28A0A1B0GU29 FAM60BP-201ENST00000578364 658 ntBASIC2.79□□□□□ -1.96
SMIM28A0A1B0GU29 AC061975.8-201ENST00000587058 721 ntBASIC2.79□□□□□ -1.96
SMIM28A0A1B0GU29 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.79□□□□□ -1.96
SMIM28A0A1B0GU29 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.79□□□□□ -1.96
SMIM28A0A1B0GU29 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.79□□□□□ -1.96
SMIM28A0A1B0GU29 AC004832.5-201ENST00000608677 401 ntBASIC2.79□□□□□ -1.96
SMIM28A0A1B0GU29 AC099778.2-201ENST00000610904 211 ntBASIC2.79□□□□□ -1.96
SMIM28A0A1B0GU29 IGHVIII-44-202ENST00000636235 289 ntBASIC2.79□□□□□ -1.96
SMIM28A0A1B0GU29 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
SMIM28A0A1B0GU29 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
SMIM28A0A1B0GU29 AL356473.1-201ENST00000406203 1408 ntBASIC2.78□□□□□ -1.96
SMIM28A0A1B0GU29 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
SMIM28A0A1B0GU29 SNORA4.1-201ENST00000364263 144 ntBASIC2.78□□□□□ -1.96
SMIM28A0A1B0GU29 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
SMIM28A0A1B0GU29 RNU6-882P-201ENST00000391025 103 ntBASIC2.78□□□□□ -1.96
SMIM28A0A1B0GU29 RNU1-101P-201ENST00000391171 127 ntBASIC2.78□□□□□ -1.96
SMIM28A0A1B0GU29 ANAPC10P1-201ENST00000395991 556 ntBASIC2.78□□□□□ -1.96
SMIM28A0A1B0GU29 AL356131.1-201ENST00000405826 414 ntBASIC2.78□□□□□ -1.96
SMIM28A0A1B0GU29 USP9YP33-201ENST00000412220 421 ntBASIC2.78□□□□□ -1.96
SMIM28A0A1B0GU29 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SMIM28A0A1B0GU29 AC109780.2-201ENST00000413467 845 ntBASIC2.78□□□□□ -1.96
SMIM28A0A1B0GU29 RPL22P18-201ENST00000417197 377 ntBASIC2.78□□□□□ -1.96
SMIM28A0A1B0GU29 BX119904.4-201ENST00000424402 301 ntBASIC2.78□□□□□ -1.96
SMIM28A0A1B0GU29 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC2.78□□□□□ -1.96
SMIM28A0A1B0GU29 MTCO1P39-201ENST00000426148 480 ntBASIC2.78□□□□□ -1.96
SMIM28A0A1B0GU29 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.78□□□□□ -1.96
SMIM28A0A1B0GU29 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.78□□□□□ -1.96
SMIM28A0A1B0GU29 USP9YP35-201ENST00000435696 412 ntBASIC2.78□□□□□ -1.96
SMIM28A0A1B0GU29 SNRPEP4-201ENST00000435815 279 ntBASIC2.78□□□□□ -1.96
SMIM28A0A1B0GU29 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.78□□□□□ -1.96
SMIM28A0A1B0GU29 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.78□□□□□ -1.96
SMIM28A0A1B0GU29 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.78□□□□□ -1.96
SMIM28A0A1B0GU29 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC2.78□□□□□ -1.96
SMIM28A0A1B0GU29 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.78□□□□□ -1.96
SMIM28A0A1B0GU29 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.78□□□□□ -1.96
SMIM28A0A1B0GU29 MTND4LP22-201ENST00000508209 276 ntBASIC2.78□□□□□ -1.96
SMIM28A0A1B0GU29 RNU6-711P-201ENST00000517255 106 ntBASIC2.78□□□□□ -1.96
SMIM28A0A1B0GU29 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC2.78□□□□□ -1.96
SMIM28A0A1B0GU29 OR4T1P-201ENST00000554933 911 ntBASIC2.78□□□□□ -1.96
SMIM28A0A1B0GU29 AL391156.1-201ENST00000554965 554 ntBASIC2.78□□□□□ -1.96
SMIM28A0A1B0GU29 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.78□□□□□ -1.96
SMIM28A0A1B0GU29 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.78□□□□□ -1.96
SMIM28A0A1B0GU29 BDH2P1-201ENST00000602288 736 ntBASIC2.78□□□□□ -1.96
SMIM28A0A1B0GU29 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.78□□□□□ -1.96
SMIM28A0A1B0GU29 BBIP1P1-201ENST00000602999 279 ntBASIC2.78□□□□□ -1.96
SMIM28A0A1B0GU29 AC107871.2-201ENST00000612894 502 ntBASIC2.78□□□□□ -1.96
SMIM28A0A1B0GU29 AL110115.1-201ENST00000614396 364 ntBASIC2.78□□□□□ -1.96
SMIM28A0A1B0GU29 AL355810.1-201ENST00000614629 552 ntBASIC2.78□□□□□ -1.96
SMIM28A0A1B0GU29 AC068831.7-201ENST00000616954 363 ntBASIC2.78□□□□□ -1.96
SMIM28A0A1B0GU29 AL357080.1-201ENST00000617394 239 ntBASIC2.78□□□□□ -1.96
SMIM28A0A1B0GU29 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.78□□□□□ -1.96
SMIM28A0A1B0GU29 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SMIM28A0A1B0GU29 AL161431.1-201ENST00000618966 4205 ntBASIC2.78□□□□□ -1.96
SMIM28A0A1B0GU29 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.78□□□□□ -1.96
SMIM28A0A1B0GU29 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.78□□□□□ -1.96
SMIM28A0A1B0GU29 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
SMIM28A0A1B0GU29 ZNF542P-204ENST00000482727 1305 ntBASIC2.77□□□□□ -1.97
SMIM28A0A1B0GU29 RNU6-28P-201ENST00000362378 107 ntBASIC2.77□□□□□ -1.97
SMIM28A0A1B0GU29 SNORD113-6-201ENST00000363345 75 ntBASIC2.77□□□□□ -1.97
SMIM28A0A1B0GU29 RNU6-289P-201ENST00000364093 107 ntBASIC2.77□□□□□ -1.97
SMIM28A0A1B0GU29 MIR27B-201ENST00000385129 97 ntBASIC2.77□□□□□ -1.97
SMIM28A0A1B0GU29 AC009963.1-201ENST00000417265 157 ntBASIC2.77□□□□□ -1.97
SMIM28A0A1B0GU29 HMGB1P49-201ENST00000418882 569 ntBASIC2.77□□□□□ -1.97
SMIM28A0A1B0GU29 AL137014.1-201ENST00000420490 1226 ntBASIC2.77□□□□□ -1.97
SMIM28A0A1B0GU29 MTCO2P5-201ENST00000422621 426 ntBASIC2.77□□□□□ -1.97
SMIM28A0A1B0GU29 UBE2D3P2-201ENST00000424409 445 ntBASIC2.77□□□□□ -1.97
SMIM28A0A1B0GU29 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC2.77□□□□□ -1.97
SMIM28A0A1B0GU29 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.77□□□□□ -1.97
SMIM28A0A1B0GU29 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.77□□□□□ -1.97
SMIM28A0A1B0GU29 MRPL50P4-201ENST00000446432 475 ntBASIC2.77□□□□□ -1.97
SMIM28A0A1B0GU29 AL513328.1-201ENST00000446460 224 ntBASIC2.77□□□□□ -1.97
SMIM28A0A1B0GU29 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.77□□□□□ -1.97
SMIM28A0A1B0GU29 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SMIM28A0A1B0GU29 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.77□□□□□ -1.97
SMIM28A0A1B0GU29 CBX3P3-201ENST00000508108 532 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms