Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nr1h3Q9Z0Y9 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Nr1h3Q9Z0Y9 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nr1h3Q9Z0Y9 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nr1h3Q9Z0Y9 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nr1h3Q9Z0Y9 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.42
Nr1h3Q9Z0Y9 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Nr1h3Q9Z0Y9 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nr1h3Q9Z0Y9 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Nr1h3Q9Z0Y9 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nr1h3Q9Z0Y9 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nr1h3Q9Z0Y9 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.64■□□□□ 0.41
Nr1h3Q9Z0Y9 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Nr1h3Q9Z0Y9 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.64■□□□□ 0.41
Nr1h3Q9Z0Y9 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nr1h3Q9Z0Y9 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC17.64■□□□□ 0.41
Nr1h3Q9Z0Y9 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Nr1h3Q9Z0Y9 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
Nr1h3Q9Z0Y9 Gm18206-201ENSMUST00000207027 926 ntBASIC17.64■□□□□ 0.41
Nr1h3Q9Z0Y9 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17.64■□□□□ 0.41
Nr1h3Q9Z0Y9 Gm6296-201ENSMUST00000222599 943 ntBASIC17.64■□□□□ 0.41
Nr1h3Q9Z0Y9 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Nr1h3Q9Z0Y9 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nr1h3Q9Z0Y9 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nr1h3Q9Z0Y9 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.64■□□□□ 0.41
Nr1h3Q9Z0Y9 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nr1h3Q9Z0Y9 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nr1h3Q9Z0Y9 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.64■□□□□ 0.41
Nr1h3Q9Z0Y9 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nr1h3Q9Z0Y9 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Nr1h3Q9Z0Y9 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Nr1h3Q9Z0Y9 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Nr1h3Q9Z0Y9 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nr1h3Q9Z0Y9 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nr1h3Q9Z0Y9 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nr1h3Q9Z0Y9 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nr1h3Q9Z0Y9 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nr1h3Q9Z0Y9 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC17.63■□□□□ 0.41
Nr1h3Q9Z0Y9 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Nr1h3Q9Z0Y9 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC17.63■□□□□ 0.41
Nr1h3Q9Z0Y9 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC17.63■□□□□ 0.41
Nr1h3Q9Z0Y9 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Nr1h3Q9Z0Y9 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.63■□□□□ 0.41
Nr1h3Q9Z0Y9 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Nr1h3Q9Z0Y9 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nr1h3Q9Z0Y9 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Nr1h3Q9Z0Y9 Gm18856-201ENSMUST00000178096 1374 ntBASIC17.63■□□□□ 0.41
Nr1h3Q9Z0Y9 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Nr1h3Q9Z0Y9 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.63■□□□□ 0.41
Nr1h3Q9Z0Y9 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nr1h3Q9Z0Y9 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nr1h3Q9Z0Y9 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nr1h3Q9Z0Y9 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Nr1h3Q9Z0Y9 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nr1h3Q9Z0Y9 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.62■□□□□ 0.41
Nr1h3Q9Z0Y9 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nr1h3Q9Z0Y9 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nr1h3Q9Z0Y9 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.62■□□□□ 0.41
Nr1h3Q9Z0Y9 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nr1h3Q9Z0Y9 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC17.62■□□□□ 0.41
Nr1h3Q9Z0Y9 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.62■□□□□ 0.41
Nr1h3Q9Z0Y9 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.62■□□□□ 0.41
Nr1h3Q9Z0Y9 Gm5867-201ENSMUST00000063197 592 ntBASIC17.62■□□□□ 0.41
Nr1h3Q9Z0Y9 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Nr1h3Q9Z0Y9 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nr1h3Q9Z0Y9 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nr1h3Q9Z0Y9 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nr1h3Q9Z0Y9 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nr1h3Q9Z0Y9 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nr1h3Q9Z0Y9 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nr1h3Q9Z0Y9 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Nr1h3Q9Z0Y9 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.62■□□□□ 0.41
Nr1h3Q9Z0Y9 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.62■□□□□ 0.41
Nr1h3Q9Z0Y9 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.61■□□□□ 0.41
Nr1h3Q9Z0Y9 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nr1h3Q9Z0Y9 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Nr1h3Q9Z0Y9 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nr1h3Q9Z0Y9 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nr1h3Q9Z0Y9 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nr1h3Q9Z0Y9 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nr1h3Q9Z0Y9 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nr1h3Q9Z0Y9 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nr1h3Q9Z0Y9 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nr1h3Q9Z0Y9 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nr1h3Q9Z0Y9 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nr1h3Q9Z0Y9 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nr1h3Q9Z0Y9 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nr1h3Q9Z0Y9 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nr1h3Q9Z0Y9 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nr1h3Q9Z0Y9 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nr1h3Q9Z0Y9 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Nr1h3Q9Z0Y9 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nr1h3Q9Z0Y9 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nr1h3Q9Z0Y9 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Nr1h3Q9Z0Y9 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nr1h3Q9Z0Y9 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.6■□□□□ 0.41
Nr1h3Q9Z0Y9 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Nr1h3Q9Z0Y9 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Nr1h3Q9Z0Y9 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
Nr1h3Q9Z0Y9 AC138767.1-201ENSMUST00000222661 415 ntBASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms