Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Col13a1Q9R1N9 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Col13a1Q9R1N9 Gm43338-201ENSMUST00000198617 2223 ntBASIC13.84□□□□□ -0.19
Col13a1Q9R1N9 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Col13a1Q9R1N9 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col13a1Q9R1N9 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col13a1Q9R1N9 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Col13a1Q9R1N9 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.19
Col13a1Q9R1N9 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Col13a1Q9R1N9 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Col13a1Q9R1N9 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Col13a1Q9R1N9 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col13a1Q9R1N9 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col13a1Q9R1N9 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col13a1Q9R1N9 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col13a1Q9R1N9 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col13a1Q9R1N9 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col13a1Q9R1N9 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Col13a1Q9R1N9 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col13a1Q9R1N9 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col13a1Q9R1N9 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col13a1Q9R1N9 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13.83□□□□□ -0.2
Col13a1Q9R1N9 Gm14494-201ENSMUST00000118786 435 ntBASIC13.83□□□□□ -0.2
Col13a1Q9R1N9 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC13.83□□□□□ -0.2
Col13a1Q9R1N9 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col13a1Q9R1N9 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col13a1Q9R1N9 Rprl3-201ENSMUST00000157400 290 ntBASIC13.83□□□□□ -0.2
Col13a1Q9R1N9 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC13.83□□□□□ -0.2
Col13a1Q9R1N9 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC13.83□□□□□ -0.2
Col13a1Q9R1N9 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Col13a1Q9R1N9 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col13a1Q9R1N9 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col13a1Q9R1N9 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col13a1Q9R1N9 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC13.83□□□□□ -0.2
Col13a1Q9R1N9 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Col13a1Q9R1N9 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col13a1Q9R1N9 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col13a1Q9R1N9 Gm5898-201ENSMUST00000121016 2071 ntBASIC13.83□□□□□ -0.2
Col13a1Q9R1N9 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC13.82□□□□□ -0.2
Col13a1Q9R1N9 Gm45244-201ENSMUST00000211328 2200 ntBASIC13.82□□□□□ -0.2
Col13a1Q9R1N9 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col13a1Q9R1N9 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Col13a1Q9R1N9 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Col13a1Q9R1N9 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col13a1Q9R1N9 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col13a1Q9R1N9 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col13a1Q9R1N9 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC13.82□□□□□ -0.2
Col13a1Q9R1N9 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col13a1Q9R1N9 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col13a1Q9R1N9 Gm13830-205ENSMUST00000201195 1155 ntBASIC13.82□□□□□ -0.2
Col13a1Q9R1N9 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC13.82□□□□□ -0.2
Col13a1Q9R1N9 Gm5186-201ENSMUST00000218781 920 ntBASIC13.82□□□□□ -0.2
Col13a1Q9R1N9 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Col13a1Q9R1N9 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Col13a1Q9R1N9 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.82□□□□□ -0.2
Col13a1Q9R1N9 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Col13a1Q9R1N9 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Col13a1Q9R1N9 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Col13a1Q9R1N9 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col13a1Q9R1N9 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col13a1Q9R1N9 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col13a1Q9R1N9 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col13a1Q9R1N9 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
Col13a1Q9R1N9 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col13a1Q9R1N9 Phf7-203ENSMUST00000226565 1971 ntBASIC13.82□□□□□ -0.2
Col13a1Q9R1N9 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Col13a1Q9R1N9 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Col13a1Q9R1N9 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Col13a1Q9R1N9 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col13a1Q9R1N9 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col13a1Q9R1N9 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC13.81□□□□□ -0.2
Col13a1Q9R1N9 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col13a1Q9R1N9 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC13.81□□□□□ -0.2
Col13a1Q9R1N9 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col13a1Q9R1N9 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col13a1Q9R1N9 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col13a1Q9R1N9 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col13a1Q9R1N9 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC13.81□□□□□ -0.2
Col13a1Q9R1N9 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Col13a1Q9R1N9 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col13a1Q9R1N9 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col13a1Q9R1N9 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col13a1Q9R1N9 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col13a1Q9R1N9 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col13a1Q9R1N9 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col13a1Q9R1N9 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Col13a1Q9R1N9 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col13a1Q9R1N9 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC13.81□□□□□ -0.2
Col13a1Q9R1N9 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col13a1Q9R1N9 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col13a1Q9R1N9 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col13a1Q9R1N9 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Col13a1Q9R1N9 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col13a1Q9R1N9 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC13.81□□□□□ -0.2
Col13a1Q9R1N9 Gm7292-201ENSMUST00000194706 2527 ntBASIC13.81□□□□□ -0.2
Col13a1Q9R1N9 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col13a1Q9R1N9 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Col13a1Q9R1N9 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC13.8□□□□□ -0.2
Col13a1Q9R1N9 Gm9867-201ENSMUST00000192212 2647 ntBASIC13.8□□□□□ -0.2
Col13a1Q9R1N9 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms