Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Clcf1Q9QZM3 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Clcf1Q9QZM3 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Clcf1Q9QZM3 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Clcf1Q9QZM3 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Clcf1Q9QZM3 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Clcf1Q9QZM3 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Clcf1Q9QZM3 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Clcf1Q9QZM3 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Clcf1Q9QZM3 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Clcf1Q9QZM3 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Clcf1Q9QZM3 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Clcf1Q9QZM3 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Clcf1Q9QZM3 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Clcf1Q9QZM3 Gm9103-201ENSMUST00000119371 405 ntBASIC14.8□□□□□ -0.04
Clcf1Q9QZM3 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.8□□□□□ -0.04
Clcf1Q9QZM3 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.8□□□□□ -0.04
Clcf1Q9QZM3 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Clcf1Q9QZM3 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Clcf1Q9QZM3 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.8□□□□□ -0.04
Clcf1Q9QZM3 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Clcf1Q9QZM3 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Clcf1Q9QZM3 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Clcf1Q9QZM3 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Clcf1Q9QZM3 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Clcf1Q9QZM3 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Clcf1Q9QZM3 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.8□□□□□ -0.04
Clcf1Q9QZM3 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Clcf1Q9QZM3 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Clcf1Q9QZM3 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Clcf1Q9QZM3 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Clcf1Q9QZM3 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Clcf1Q9QZM3 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Clcf1Q9QZM3 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Clcf1Q9QZM3 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Clcf1Q9QZM3 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Clcf1Q9QZM3 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Clcf1Q9QZM3 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.79□□□□□ -0.04
Clcf1Q9QZM3 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Clcf1Q9QZM3 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Clcf1Q9QZM3 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.79□□□□□ -0.04
Clcf1Q9QZM3 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Clcf1Q9QZM3 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Clcf1Q9QZM3 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Clcf1Q9QZM3 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Clcf1Q9QZM3 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Clcf1Q9QZM3 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Clcf1Q9QZM3 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Clcf1Q9QZM3 Gm45328-201ENSMUST00000210942 917 ntBASIC14.79□□□□□ -0.04
Clcf1Q9QZM3 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Clcf1Q9QZM3 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.79□□□□□ -0.04
Clcf1Q9QZM3 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Clcf1Q9QZM3 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Clcf1Q9QZM3 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Clcf1Q9QZM3 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Clcf1Q9QZM3 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Clcf1Q9QZM3 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Clcf1Q9QZM3 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Clcf1Q9QZM3 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clcf1Q9QZM3 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clcf1Q9QZM3 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Clcf1Q9QZM3 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Clcf1Q9QZM3 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clcf1Q9QZM3 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clcf1Q9QZM3 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clcf1Q9QZM3 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.78□□□□□ -0.04
Clcf1Q9QZM3 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Clcf1Q9QZM3 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clcf1Q9QZM3 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clcf1Q9QZM3 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.78□□□□□ -0.04
Clcf1Q9QZM3 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Clcf1Q9QZM3 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Clcf1Q9QZM3 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clcf1Q9QZM3 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Clcf1Q9QZM3 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clcf1Q9QZM3 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14.78□□□□□ -0.04
Clcf1Q9QZM3 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clcf1Q9QZM3 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clcf1Q9QZM3 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Clcf1Q9QZM3 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clcf1Q9QZM3 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clcf1Q9QZM3 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Clcf1Q9QZM3 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Clcf1Q9QZM3 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Clcf1Q9QZM3 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Clcf1Q9QZM3 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Clcf1Q9QZM3 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Clcf1Q9QZM3 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Clcf1Q9QZM3 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Clcf1Q9QZM3 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Clcf1Q9QZM3 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Clcf1Q9QZM3 Gm44450-201ENSMUST00000199528 114 ntBASIC14.77□□□□□ -0.05
Clcf1Q9QZM3 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Clcf1Q9QZM3 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Clcf1Q9QZM3 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Clcf1Q9QZM3 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Clcf1Q9QZM3 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Clcf1Q9QZM3 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC14.77□□□□□ -0.05
Clcf1Q9QZM3 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Clcf1Q9QZM3 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms