Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.29■□□□□ 0.2
Shroom3Q9QXN0 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shroom3Q9QXN0 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
Shroom3Q9QXN0 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Shroom3Q9QXN0 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shroom3Q9QXN0 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Shroom3Q9QXN0 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Shroom3Q9QXN0 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shroom3Q9QXN0 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shroom3Q9QXN0 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.29■□□□□ 0.2
Shroom3Q9QXN0 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shroom3Q9QXN0 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Shroom3Q9QXN0 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shroom3Q9QXN0 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shroom3Q9QXN0 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shroom3Q9QXN0 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Shroom3Q9QXN0 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shroom3Q9QXN0 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shroom3Q9QXN0 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shroom3Q9QXN0 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shroom3Q9QXN0 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.28■□□□□ 0.2
Shroom3Q9QXN0 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Shroom3Q9QXN0 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.28■□□□□ 0.2
Shroom3Q9QXN0 Mir8098-201ENSMUST00000184011 137 ntBASIC16.28■□□□□ 0.2
Shroom3Q9QXN0 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shroom3Q9QXN0 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
Shroom3Q9QXN0 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shroom3Q9QXN0 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shroom3Q9QXN0 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shroom3Q9QXN0 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shroom3Q9QXN0 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shroom3Q9QXN0 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shroom3Q9QXN0 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Shroom3Q9QXN0 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.28■□□□□ 0.2
Shroom3Q9QXN0 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shroom3Q9QXN0 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Shroom3Q9QXN0 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shroom3Q9QXN0 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Shroom3Q9QXN0 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Shroom3Q9QXN0 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Shroom3Q9QXN0 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shroom3Q9QXN0 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Shroom3Q9QXN0 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shroom3Q9QXN0 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shroom3Q9QXN0 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shroom3Q9QXN0 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Shroom3Q9QXN0 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.27■□□□□ 0.2
Shroom3Q9QXN0 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Shroom3Q9QXN0 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Shroom3Q9QXN0 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Shroom3Q9QXN0 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Shroom3Q9QXN0 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Shroom3Q9QXN0 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Shroom3Q9QXN0 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.27■□□□□ 0.2
Shroom3Q9QXN0 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.27■□□□□ 0.2
Shroom3Q9QXN0 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Shroom3Q9QXN0 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Shroom3Q9QXN0 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Shroom3Q9QXN0 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Shroom3Q9QXN0 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Shroom3Q9QXN0 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Shroom3Q9QXN0 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Shroom3Q9QXN0 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Shroom3Q9QXN0 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Shroom3Q9QXN0 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
Shroom3Q9QXN0 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.27■□□□□ 0.19
Shroom3Q9QXN0 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.27■□□□□ 0.19
Shroom3Q9QXN0 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Shroom3Q9QXN0 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.27■□□□□ 0.19
Shroom3Q9QXN0 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Shroom3Q9QXN0 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Shroom3Q9QXN0 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Shroom3Q9QXN0 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shroom3Q9QXN0 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shroom3Q9QXN0 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shroom3Q9QXN0 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shroom3Q9QXN0 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.26■□□□□ 0.19
Shroom3Q9QXN0 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.26■□□□□ 0.19
Shroom3Q9QXN0 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.26■□□□□ 0.19
Shroom3Q9QXN0 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shroom3Q9QXN0 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Shroom3Q9QXN0 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Shroom3Q9QXN0 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shroom3Q9QXN0 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Shroom3Q9QXN0 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shroom3Q9QXN0 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shroom3Q9QXN0 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shroom3Q9QXN0 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Shroom3Q9QXN0 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shroom3Q9QXN0 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Shroom3Q9QXN0 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.26■□□□□ 0.19
Shroom3Q9QXN0 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shroom3Q9QXN0 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.26■□□□□ 0.19
Shroom3Q9QXN0 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Shroom3Q9QXN0 Gm6443-201ENSMUST00000203599 874 ntBASIC16.26■□□□□ 0.19
Shroom3Q9QXN0 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shroom3Q9QXN0 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Shroom3Q9QXN0 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shroom3Q9QXN0 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shroom3Q9QXN0 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms