Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cacna1fQ9JIS7 AC151286.1-201ENSMUST00000198489 145 ntBASIC18.42■□□□□ 0.54
Cacna1fQ9JIS7 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Cacna1fQ9JIS7 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cacna1fQ9JIS7 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cacna1fQ9JIS7 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cacna1fQ9JIS7 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cacna1fQ9JIS7 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cacna1fQ9JIS7 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Cacna1fQ9JIS7 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cacna1fQ9JIS7 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cacna1fQ9JIS7 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cacna1fQ9JIS7 AC154621.1-201ENSMUST00000226155 1119 ntBASIC18.41■□□□□ 0.54
Cacna1fQ9JIS7 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
Cacna1fQ9JIS7 AC119177.1-201ENSMUST00000227647 1332 ntBASIC18.41■□□□□ 0.54
Cacna1fQ9JIS7 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cacna1fQ9JIS7 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC18.41■□□□□ 0.54
Cacna1fQ9JIS7 Gm11185-201ENSMUST00000117732 1007 ntBASIC18.41■□□□□ 0.54
Cacna1fQ9JIS7 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC18.41■□□□□ 0.54
Cacna1fQ9JIS7 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC18.41■□□□□ 0.54
Cacna1fQ9JIS7 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cacna1fQ9JIS7 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cacna1fQ9JIS7 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Cacna1fQ9JIS7 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cacna1fQ9JIS7 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cacna1fQ9JIS7 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cacna1fQ9JIS7 Best4-ps-201ENSMUST00000129783 1380 ntBASIC18.4■□□□□ 0.54
Cacna1fQ9JIS7 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cacna1fQ9JIS7 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cacna1fQ9JIS7 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cacna1fQ9JIS7 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cacna1fQ9JIS7 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC18.4■□□□□ 0.54
Cacna1fQ9JIS7 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC18.4■□□□□ 0.54
Cacna1fQ9JIS7 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC18.4■□□□□ 0.54
Cacna1fQ9JIS7 Gm15500-202ENSMUST00000071641 1019 ntBASIC18.4■□□□□ 0.54
Cacna1fQ9JIS7 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cacna1fQ9JIS7 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cacna1fQ9JIS7 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Cacna1fQ9JIS7 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
Cacna1fQ9JIS7 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.39■□□□□ 0.54
Cacna1fQ9JIS7 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
Cacna1fQ9JIS7 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cacna1fQ9JIS7 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Cacna1fQ9JIS7 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC18.39■□□□□ 0.53
Cacna1fQ9JIS7 Gm18622-201ENSMUST00000219361 595 ntBASIC18.39■□□□□ 0.53
Cacna1fQ9JIS7 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cacna1fQ9JIS7 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
Cacna1fQ9JIS7 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cacna1fQ9JIS7 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cacna1fQ9JIS7 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
Cacna1fQ9JIS7 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cacna1fQ9JIS7 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cacna1fQ9JIS7 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cacna1fQ9JIS7 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC18.39■□□□□ 0.53
Cacna1fQ9JIS7 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Cacna1fQ9JIS7 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cacna1fQ9JIS7 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC18.39■□□□□ 0.53
Cacna1fQ9JIS7 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC18.39■□□□□ 0.53
Cacna1fQ9JIS7 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC18.38■□□□□ 0.53
Cacna1fQ9JIS7 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cacna1fQ9JIS7 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cacna1fQ9JIS7 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cacna1fQ9JIS7 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Cacna1fQ9JIS7 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cacna1fQ9JIS7 Gm17968-201ENSMUST00000194902 784 ntBASIC18.38■□□□□ 0.53
Cacna1fQ9JIS7 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cacna1fQ9JIS7 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Cacna1fQ9JIS7 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC18.38■□□□□ 0.53
Cacna1fQ9JIS7 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cacna1fQ9JIS7 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cacna1fQ9JIS7 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC18.38■□□□□ 0.53
Cacna1fQ9JIS7 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.38■□□□□ 0.53
Cacna1fQ9JIS7 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cacna1fQ9JIS7 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC18.38■□□□□ 0.53
Cacna1fQ9JIS7 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cacna1fQ9JIS7 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC18.37■□□□□ 0.53
Cacna1fQ9JIS7 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cacna1fQ9JIS7 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.37■□□□□ 0.53
Cacna1fQ9JIS7 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cacna1fQ9JIS7 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Cacna1fQ9JIS7 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC18.37■□□□□ 0.53
Cacna1fQ9JIS7 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC18.37■□□□□ 0.53
Cacna1fQ9JIS7 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cacna1fQ9JIS7 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cacna1fQ9JIS7 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cacna1fQ9JIS7 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cacna1fQ9JIS7 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.37■□□□□ 0.53
Cacna1fQ9JIS7 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cacna1fQ9JIS7 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cacna1fQ9JIS7 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Cacna1fQ9JIS7 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cacna1fQ9JIS7 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cacna1fQ9JIS7 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cacna1fQ9JIS7 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Cacna1fQ9JIS7 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC18.37■□□□□ 0.53
Cacna1fQ9JIS7 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC18.37■□□□□ 0.53
Cacna1fQ9JIS7 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cacna1fQ9JIS7 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cacna1fQ9JIS7 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Cacna1fQ9JIS7 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms