Protein–RNA interactions for Protein: Q9ET35

Tnfrsf13b, Tumor necrosis factor receptor superfamily member 13B, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf13bQ9ET35 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf13bQ9ET35 Gm5643-201ENSMUST00000117081 966 ntBASIC12.84□□□□□ -0.35
Tnfrsf13bQ9ET35 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf13bQ9ET35 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf13bQ9ET35 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf13bQ9ET35 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf13bQ9ET35 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Tnfrsf13bQ9ET35 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf13bQ9ET35 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf13bQ9ET35 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf13bQ9ET35 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf13bQ9ET35 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf13bQ9ET35 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf13bQ9ET35 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf13bQ9ET35 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf13bQ9ET35 Slc35b2-202ENSMUST00000223987 1766 ntBASIC12.84□□□□□ -0.35
Tnfrsf13bQ9ET35 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC12.84□□□□□ -0.35
Tnfrsf13bQ9ET35 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf13bQ9ET35 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf13bQ9ET35 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf13bQ9ET35 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf13bQ9ET35 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Tnfrsf13bQ9ET35 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Tnfrsf13bQ9ET35 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Tnfrsf13bQ9ET35 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Tnfrsf13bQ9ET35 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Tnfrsf13bQ9ET35 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfrsf13bQ9ET35 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC12.83□□□□□ -0.36
Tnfrsf13bQ9ET35 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Tnfrsf13bQ9ET35 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfrsf13bQ9ET35 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfrsf13bQ9ET35 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfrsf13bQ9ET35 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfrsf13bQ9ET35 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC12.83□□□□□ -0.36
Tnfrsf13bQ9ET35 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfrsf13bQ9ET35 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfrsf13bQ9ET35 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfrsf13bQ9ET35 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Tnfrsf13bQ9ET35 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfrsf13bQ9ET35 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfrsf13bQ9ET35 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfrsf13bQ9ET35 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Tnfrsf13bQ9ET35 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.83□□□□□ -0.36
Tnfrsf13bQ9ET35 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC12.82□□□□□ -0.36
Tnfrsf13bQ9ET35 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfrsf13bQ9ET35 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfrsf13bQ9ET35 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfrsf13bQ9ET35 AC154412.1-201ENSMUST00000226540 2786 ntBASIC12.82□□□□□ -0.36
Tnfrsf13bQ9ET35 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfrsf13bQ9ET35 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfrsf13bQ9ET35 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Tnfrsf13bQ9ET35 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfrsf13bQ9ET35 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfrsf13bQ9ET35 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Tnfrsf13bQ9ET35 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfrsf13bQ9ET35 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfrsf13bQ9ET35 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC12.82□□□□□ -0.36
Tnfrsf13bQ9ET35 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfrsf13bQ9ET35 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfrsf13bQ9ET35 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfrsf13bQ9ET35 Gm14464-201ENSMUST00000119658 1254 ntBASIC12.82□□□□□ -0.36
Tnfrsf13bQ9ET35 Gm12441-201ENSMUST00000121806 588 ntBASIC12.82□□□□□ -0.36
Tnfrsf13bQ9ET35 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfrsf13bQ9ET35 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfrsf13bQ9ET35 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfrsf13bQ9ET35 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfrsf13bQ9ET35 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfrsf13bQ9ET35 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Tnfrsf13bQ9ET35 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfrsf13bQ9ET35 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Tnfrsf13bQ9ET35 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfrsf13bQ9ET35 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfrsf13bQ9ET35 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfrsf13bQ9ET35 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfrsf13bQ9ET35 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfrsf13bQ9ET35 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfrsf13bQ9ET35 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfrsf13bQ9ET35 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Tnfrsf13bQ9ET35 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfrsf13bQ9ET35 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf13bQ9ET35 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf13bQ9ET35 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf13bQ9ET35 Gm42901-201ENSMUST00000197735 3171 ntBASIC12.81□□□□□ -0.36
Tnfrsf13bQ9ET35 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf13bQ9ET35 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf13bQ9ET35 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf13bQ9ET35 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf13bQ9ET35 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf13bQ9ET35 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf13bQ9ET35 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf13bQ9ET35 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Tnfrsf13bQ9ET35 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Tnfrsf13bQ9ET35 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf13bQ9ET35 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf13bQ9ET35 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf13bQ9ET35 Gm12527-201ENSMUST00000117967 564 ntBASIC12.81□□□□□ -0.36
Tnfrsf13bQ9ET35 Gm13186-201ENSMUST00000118031 316 ntBASIC12.81□□□□□ -0.36
Tnfrsf13bQ9ET35 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC12.81□□□□□ -0.36
Tnfrsf13bQ9ET35 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Tnfrsf13bQ9ET35 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms