Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp2aQ9DB34 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp2aQ9DB34 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Chmp2aQ9DB34 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Chmp2aQ9DB34 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp2aQ9DB34 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp2aQ9DB34 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp2aQ9DB34 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp2aQ9DB34 Gm7284-201ENSMUST00000131667 944 ntBASIC17.01■□□□□ 0.31
Chmp2aQ9DB34 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Chmp2aQ9DB34 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp2aQ9DB34 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Chmp2aQ9DB34 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.01■□□□□ 0.31
Chmp2aQ9DB34 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp2aQ9DB34 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp2aQ9DB34 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp2aQ9DB34 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp2aQ9DB34 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Chmp2aQ9DB34 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp2aQ9DB34 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp2aQ9DB34 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp2aQ9DB34 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp2aQ9DB34 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Chmp2aQ9DB34 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp2aQ9DB34 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp2aQ9DB34 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp2aQ9DB34 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
Chmp2aQ9DB34 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
Chmp2aQ9DB34 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp2aQ9DB34 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp2aQ9DB34 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp2aQ9DB34 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Chmp2aQ9DB34 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp2aQ9DB34 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp2aQ9DB34 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp2aQ9DB34 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp2aQ9DB34 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp2aQ9DB34 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp2aQ9DB34 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp2aQ9DB34 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Chmp2aQ9DB34 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.99■□□□□ 0.31
Chmp2aQ9DB34 Gm14859-201ENSMUST00000117752 357 ntBASIC16.99■□□□□ 0.31
Chmp2aQ9DB34 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp2aQ9DB34 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.99■□□□□ 0.31
Chmp2aQ9DB34 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.99■□□□□ 0.31
Chmp2aQ9DB34 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp2aQ9DB34 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp2aQ9DB34 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp2aQ9DB34 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp2aQ9DB34 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp2aQ9DB34 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp2aQ9DB34 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp2aQ9DB34 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp2aQ9DB34 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp2aQ9DB34 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Chmp2aQ9DB34 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp2aQ9DB34 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp2aQ9DB34 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp2aQ9DB34 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp2aQ9DB34 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp2aQ9DB34 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp2aQ9DB34 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp2aQ9DB34 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.98■□□□□ 0.31
Chmp2aQ9DB34 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.98■□□□□ 0.31
Chmp2aQ9DB34 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp2aQ9DB34 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp2aQ9DB34 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.98■□□□□ 0.31
Chmp2aQ9DB34 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp2aQ9DB34 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.98■□□□□ 0.31
Chmp2aQ9DB34 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
Chmp2aQ9DB34 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp2aQ9DB34 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp2aQ9DB34 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp2aQ9DB34 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp2aQ9DB34 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp2aQ9DB34 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp2aQ9DB34 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp2aQ9DB34 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp2aQ9DB34 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp2aQ9DB34 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp2aQ9DB34 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp2aQ9DB34 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.97■□□□□ 0.31
Chmp2aQ9DB34 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp2aQ9DB34 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp2aQ9DB34 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp2aQ9DB34 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp2aQ9DB34 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp2aQ9DB34 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.97■□□□□ 0.31
Chmp2aQ9DB34 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Chmp2aQ9DB34 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.97■□□□□ 0.31
Chmp2aQ9DB34 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Chmp2aQ9DB34 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp2aQ9DB34 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Chmp2aQ9DB34 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.97■□□□□ 0.31
Chmp2aQ9DB34 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
Chmp2aQ9DB34 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp2aQ9DB34 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp2aQ9DB34 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp2aQ9DB34 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp2aQ9DB34 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms