Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC14.14□□□□□ -0.15
Mbd3l1Q9D9H3 Gm37820-201ENSMUST00000194021 2147 ntBASIC14.14□□□□□ -0.15
Mbd3l1Q9D9H3 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Mbd3l1Q9D9H3 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Mbd3l1Q9D9H3 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Mbd3l1Q9D9H3 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Mbd3l1Q9D9H3 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Mbd3l1Q9D9H3 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Mbd3l1Q9D9H3 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Mbd3l1Q9D9H3 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Mbd3l1Q9D9H3 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC14.13□□□□□ -0.15
Mbd3l1Q9D9H3 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Mbd3l1Q9D9H3 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Mbd3l1Q9D9H3 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Mbd3l1Q9D9H3 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Mbd3l1Q9D9H3 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Mbd3l1Q9D9H3 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Mbd3l1Q9D9H3 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.13□□□□□ -0.15
Mbd3l1Q9D9H3 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Mbd3l1Q9D9H3 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Mbd3l1Q9D9H3 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Mbd3l1Q9D9H3 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Mbd3l1Q9D9H3 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
Mbd3l1Q9D9H3 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Mbd3l1Q9D9H3 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Mbd3l1Q9D9H3 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.12□□□□□ -0.15
Mbd3l1Q9D9H3 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mbd3l1Q9D9H3 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mbd3l1Q9D9H3 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mbd3l1Q9D9H3 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mbd3l1Q9D9H3 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mbd3l1Q9D9H3 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mbd3l1Q9D9H3 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Mbd3l1Q9D9H3 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mbd3l1Q9D9H3 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Mbd3l1Q9D9H3 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mbd3l1Q9D9H3 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Mbd3l1Q9D9H3 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC14.12□□□□□ -0.15
Mbd3l1Q9D9H3 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Mbd3l1Q9D9H3 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mbd3l1Q9D9H3 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mbd3l1Q9D9H3 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mbd3l1Q9D9H3 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mbd3l1Q9D9H3 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mbd3l1Q9D9H3 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.12□□□□□ -0.15
Mbd3l1Q9D9H3 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mbd3l1Q9D9H3 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Mbd3l1Q9D9H3 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.12□□□□□ -0.15
Mbd3l1Q9D9H3 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mbd3l1Q9D9H3 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Mbd3l1Q9D9H3 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mbd3l1Q9D9H3 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mbd3l1Q9D9H3 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Mbd3l1Q9D9H3 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Mbd3l1Q9D9H3 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mbd3l1Q9D9H3 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.11□□□□□ -0.15
Mbd3l1Q9D9H3 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.11□□□□□ -0.15
Mbd3l1Q9D9H3 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mbd3l1Q9D9H3 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mbd3l1Q9D9H3 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Mbd3l1Q9D9H3 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC14.11□□□□□ -0.15
Mbd3l1Q9D9H3 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Mbd3l1Q9D9H3 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mbd3l1Q9D9H3 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Mbd3l1Q9D9H3 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Mbd3l1Q9D9H3 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mbd3l1Q9D9H3 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mbd3l1Q9D9H3 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Mbd3l1Q9D9H3 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Mbd3l1Q9D9H3 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mbd3l1Q9D9H3 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mbd3l1Q9D9H3 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Mbd3l1Q9D9H3 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Mbd3l1Q9D9H3 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Mbd3l1Q9D9H3 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.11□□□□□ -0.15
Mbd3l1Q9D9H3 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mbd3l1Q9D9H3 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Mbd3l1Q9D9H3 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mbd3l1Q9D9H3 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mbd3l1Q9D9H3 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Mbd3l1Q9D9H3 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mbd3l1Q9D9H3 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Mbd3l1Q9D9H3 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Mbd3l1Q9D9H3 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mbd3l1Q9D9H3 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mbd3l1Q9D9H3 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mbd3l1Q9D9H3 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC14.11□□□□□ -0.15
Mbd3l1Q9D9H3 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mbd3l1Q9D9H3 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mbd3l1Q9D9H3 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mbd3l1Q9D9H3 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.1□□□□□ -0.15
Mbd3l1Q9D9H3 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mbd3l1Q9D9H3 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Mbd3l1Q9D9H3 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mbd3l1Q9D9H3 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Mbd3l1Q9D9H3 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mbd3l1Q9D9H3 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Mbd3l1Q9D9H3 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mbd3l1Q9D9H3 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.1□□□□□ -0.15
Mbd3l1Q9D9H3 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms