Protein–RNA interactions for Protein: Q9D5J6

Shpk, Sedoheptulokinase, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShpkQ9D5J6 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ShpkQ9D5J6 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ShpkQ9D5J6 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
ShpkQ9D5J6 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ShpkQ9D5J6 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ShpkQ9D5J6 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ShpkQ9D5J6 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.67□□□□□ -0.22
ShpkQ9D5J6 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ShpkQ9D5J6 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
ShpkQ9D5J6 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC13.67□□□□□ -0.22
ShpkQ9D5J6 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ShpkQ9D5J6 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
ShpkQ9D5J6 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ShpkQ9D5J6 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ShpkQ9D5J6 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ShpkQ9D5J6 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ShpkQ9D5J6 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ShpkQ9D5J6 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC13.67□□□□□ -0.22
ShpkQ9D5J6 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
ShpkQ9D5J6 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ShpkQ9D5J6 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ShpkQ9D5J6 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC13.66□□□□□ -0.22
ShpkQ9D5J6 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ShpkQ9D5J6 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
ShpkQ9D5J6 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
ShpkQ9D5J6 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
ShpkQ9D5J6 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ShpkQ9D5J6 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ShpkQ9D5J6 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ShpkQ9D5J6 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ShpkQ9D5J6 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC13.66□□□□□ -0.22
ShpkQ9D5J6 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ShpkQ9D5J6 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ShpkQ9D5J6 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC13.66□□□□□ -0.22
ShpkQ9D5J6 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ShpkQ9D5J6 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ShpkQ9D5J6 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ShpkQ9D5J6 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ShpkQ9D5J6 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
ShpkQ9D5J6 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
ShpkQ9D5J6 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.66□□□□□ -0.22
ShpkQ9D5J6 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ShpkQ9D5J6 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
ShpkQ9D5J6 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
ShpkQ9D5J6 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
ShpkQ9D5J6 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
ShpkQ9D5J6 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ShpkQ9D5J6 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ShpkQ9D5J6 Gm13509-201ENSMUST00000119733 1308 ntBASIC13.65□□□□□ -0.22
ShpkQ9D5J6 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
ShpkQ9D5J6 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ShpkQ9D5J6 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ShpkQ9D5J6 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
ShpkQ9D5J6 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ShpkQ9D5J6 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC13.65□□□□□ -0.22
ShpkQ9D5J6 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ShpkQ9D5J6 CT010444.2-201ENSMUST00000217877 1629 ntBASIC13.65□□□□□ -0.22
ShpkQ9D5J6 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ShpkQ9D5J6 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ShpkQ9D5J6 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ShpkQ9D5J6 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ShpkQ9D5J6 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ShpkQ9D5J6 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC13.65□□□□□ -0.22
ShpkQ9D5J6 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
ShpkQ9D5J6 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
ShpkQ9D5J6 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC13.65□□□□□ -0.22
ShpkQ9D5J6 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
ShpkQ9D5J6 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ShpkQ9D5J6 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
ShpkQ9D5J6 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ShpkQ9D5J6 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC13.65□□□□□ -0.22
ShpkQ9D5J6 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
ShpkQ9D5J6 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.65□□□□□ -0.22
ShpkQ9D5J6 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ShpkQ9D5J6 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC13.65□□□□□ -0.22
ShpkQ9D5J6 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ShpkQ9D5J6 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
ShpkQ9D5J6 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ShpkQ9D5J6 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
ShpkQ9D5J6 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC13.64□□□□□ -0.23
ShpkQ9D5J6 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ShpkQ9D5J6 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ShpkQ9D5J6 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ShpkQ9D5J6 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ShpkQ9D5J6 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ShpkQ9D5J6 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
ShpkQ9D5J6 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ShpkQ9D5J6 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ShpkQ9D5J6 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
ShpkQ9D5J6 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ShpkQ9D5J6 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ShpkQ9D5J6 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ShpkQ9D5J6 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ShpkQ9D5J6 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
ShpkQ9D5J6 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ShpkQ9D5J6 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
ShpkQ9D5J6 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ShpkQ9D5J6 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC13.64□□□□□ -0.23
ShpkQ9D5J6 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ShpkQ9D5J6 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms