Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Vps33aQ9D2N9 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps33aQ9D2N9 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps33aQ9D2N9 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps33aQ9D2N9 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps33aQ9D2N9 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps33aQ9D2N9 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Vps33aQ9D2N9 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps33aQ9D2N9 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps33aQ9D2N9 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps33aQ9D2N9 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps33aQ9D2N9 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Vps33aQ9D2N9 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps33aQ9D2N9 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Vps33aQ9D2N9 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Vps33aQ9D2N9 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Vps33aQ9D2N9 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps33aQ9D2N9 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Vps33aQ9D2N9 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.32■□□□□ 0.36
Vps33aQ9D2N9 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.32■□□□□ 0.36
Vps33aQ9D2N9 Gm5874-201ENSMUST00000096101 508 ntBASIC17.32■□□□□ 0.36
Vps33aQ9D2N9 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps33aQ9D2N9 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps33aQ9D2N9 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Vps33aQ9D2N9 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps33aQ9D2N9 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Vps33aQ9D2N9 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps33aQ9D2N9 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps33aQ9D2N9 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Vps33aQ9D2N9 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps33aQ9D2N9 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.31■□□□□ 0.36
Vps33aQ9D2N9 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps33aQ9D2N9 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Vps33aQ9D2N9 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps33aQ9D2N9 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.31■□□□□ 0.36
Vps33aQ9D2N9 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.31■□□□□ 0.36
Vps33aQ9D2N9 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps33aQ9D2N9 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps33aQ9D2N9 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps33aQ9D2N9 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Vps33aQ9D2N9 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps33aQ9D2N9 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps33aQ9D2N9 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps33aQ9D2N9 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
Vps33aQ9D2N9 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps33aQ9D2N9 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps33aQ9D2N9 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps33aQ9D2N9 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps33aQ9D2N9 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps33aQ9D2N9 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps33aQ9D2N9 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Vps33aQ9D2N9 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps33aQ9D2N9 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.3■□□□□ 0.36
Vps33aQ9D2N9 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Vps33aQ9D2N9 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps33aQ9D2N9 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps33aQ9D2N9 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Vps33aQ9D2N9 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Vps33aQ9D2N9 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.3■□□□□ 0.36
Vps33aQ9D2N9 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Vps33aQ9D2N9 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps33aQ9D2N9 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps33aQ9D2N9 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps33aQ9D2N9 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps33aQ9D2N9 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps33aQ9D2N9 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Vps33aQ9D2N9 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps33aQ9D2N9 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Vps33aQ9D2N9 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps33aQ9D2N9 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps33aQ9D2N9 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC17.29■□□□□ 0.36
Vps33aQ9D2N9 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Vps33aQ9D2N9 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps33aQ9D2N9 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps33aQ9D2N9 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps33aQ9D2N9 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps33aQ9D2N9 Mir6349-201ENSMUST00000184059 97 ntBASIC17.29■□□□□ 0.36
Vps33aQ9D2N9 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Vps33aQ9D2N9 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Vps33aQ9D2N9 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps33aQ9D2N9 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Vps33aQ9D2N9 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps33aQ9D2N9 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps33aQ9D2N9 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps33aQ9D2N9 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps33aQ9D2N9 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps33aQ9D2N9 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps33aQ9D2N9 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps33aQ9D2N9 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps33aQ9D2N9 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps33aQ9D2N9 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps33aQ9D2N9 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps33aQ9D2N9 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps33aQ9D2N9 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps33aQ9D2N9 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.28■□□□□ 0.36
Vps33aQ9D2N9 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps33aQ9D2N9 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps33aQ9D2N9 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Vps33aQ9D2N9 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps33aQ9D2N9 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms