Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim13Q9CYB0 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim13Q9CYB0 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim13Q9CYB0 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trim13Q9CYB0 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.1■□□□□ 0.01
Trim13Q9CYB0 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim13Q9CYB0 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim13Q9CYB0 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim13Q9CYB0 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim13Q9CYB0 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim13Q9CYB0 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.1■□□□□ 0.01
Trim13Q9CYB0 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.1■□□□□ 0.01
Trim13Q9CYB0 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim13Q9CYB0 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim13Q9CYB0 Gm12527-201ENSMUST00000117967 564 ntBASIC15.1■□□□□ 0.01
Trim13Q9CYB0 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim13Q9CYB0 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim13Q9CYB0 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim13Q9CYB0 Gm20049-201ENSMUST00000219950 730 ntBASIC15.1■□□□□ 0.01
Trim13Q9CYB0 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim13Q9CYB0 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC15.1■□□□□ 0.01
Trim13Q9CYB0 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trim13Q9CYB0 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim13Q9CYB0 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trim13Q9CYB0 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim13Q9CYB0 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim13Q9CYB0 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim13Q9CYB0 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim13Q9CYB0 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim13Q9CYB0 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim13Q9CYB0 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.09■□□□□ 0.01
Trim13Q9CYB0 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim13Q9CYB0 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim13Q9CYB0 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Trim13Q9CYB0 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.09■□□□□ 0.01
Trim13Q9CYB0 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trim13Q9CYB0 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim13Q9CYB0 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC15.09■□□□□ 0.01
Trim13Q9CYB0 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim13Q9CYB0 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim13Q9CYB0 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim13Q9CYB0 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim13Q9CYB0 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim13Q9CYB0 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim13Q9CYB0 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trim13Q9CYB0 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim13Q9CYB0 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim13Q9CYB0 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim13Q9CYB0 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Trim13Q9CYB0 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim13Q9CYB0 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trim13Q9CYB0 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trim13Q9CYB0 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trim13Q9CYB0 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Trim13Q9CYB0 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trim13Q9CYB0 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Trim13Q9CYB0 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Trim13Q9CYB0 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim13Q9CYB0 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.08■□□□□ 0
Trim13Q9CYB0 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim13Q9CYB0 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC15.08■□□□□ 0
Trim13Q9CYB0 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC15.08■□□□□ 0
Trim13Q9CYB0 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trim13Q9CYB0 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim13Q9CYB0 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
Trim13Q9CYB0 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim13Q9CYB0 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trim13Q9CYB0 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim13Q9CYB0 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.08■□□□□ 0
Trim13Q9CYB0 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Trim13Q9CYB0 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim13Q9CYB0 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim13Q9CYB0 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trim13Q9CYB0 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Trim13Q9CYB0 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim13Q9CYB0 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.07■□□□□ 0
Trim13Q9CYB0 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trim13Q9CYB0 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC15.07■□□□□ 0
Trim13Q9CYB0 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim13Q9CYB0 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim13Q9CYB0 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim13Q9CYB0 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC15.07■□□□□ 0
Trim13Q9CYB0 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC15.07■□□□□ 0
Trim13Q9CYB0 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trim13Q9CYB0 Gm27000-201ENSMUST00000182943 842 ntBASIC15.07■□□□□ 0
Trim13Q9CYB0 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC15.07■□□□□ 0
Trim13Q9CYB0 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trim13Q9CYB0 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trim13Q9CYB0 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim13Q9CYB0 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim13Q9CYB0 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trim13Q9CYB0 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim13Q9CYB0 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim13Q9CYB0 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.07■□□□□ 0
Trim13Q9CYB0 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.07■□□□□ 0
Trim13Q9CYB0 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trim13Q9CYB0 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim13Q9CYB0 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim13Q9CYB0 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trim13Q9CYB0 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms