Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx47Q9CWX9 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx47Q9CWX9 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx47Q9CWX9 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx47Q9CWX9 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx47Q9CWX9 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx47Q9CWX9 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx47Q9CWX9 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx47Q9CWX9 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx47Q9CWX9 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.81■□□□□ 0.28
Ddx47Q9CWX9 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx47Q9CWX9 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx47Q9CWX9 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx47Q9CWX9 Mir5133-201ENSMUST00000174955 77 ntBASIC16.81■□□□□ 0.28
Ddx47Q9CWX9 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC16.81■□□□□ 0.28
Ddx47Q9CWX9 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx47Q9CWX9 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx47Q9CWX9 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx47Q9CWX9 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx47Q9CWX9 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx47Q9CWX9 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx47Q9CWX9 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx47Q9CWX9 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Ddx47Q9CWX9 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx47Q9CWX9 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx47Q9CWX9 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx47Q9CWX9 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx47Q9CWX9 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx47Q9CWX9 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx47Q9CWX9 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx47Q9CWX9 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Ddx47Q9CWX9 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx47Q9CWX9 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.8■□□□□ 0.28
Ddx47Q9CWX9 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC16.8■□□□□ 0.28
Ddx47Q9CWX9 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx47Q9CWX9 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx47Q9CWX9 Gm12382-201ENSMUST00000122005 922 ntBASIC16.8■□□□□ 0.28
Ddx47Q9CWX9 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC16.8■□□□□ 0.28
Ddx47Q9CWX9 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Ddx47Q9CWX9 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx47Q9CWX9 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx47Q9CWX9 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx47Q9CWX9 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx47Q9CWX9 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx47Q9CWX9 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx47Q9CWX9 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx47Q9CWX9 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx47Q9CWX9 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx47Q9CWX9 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Ddx47Q9CWX9 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx47Q9CWX9 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx47Q9CWX9 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx47Q9CWX9 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx47Q9CWX9 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx47Q9CWX9 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx47Q9CWX9 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx47Q9CWX9 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx47Q9CWX9 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx47Q9CWX9 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.79■□□□□ 0.28
Ddx47Q9CWX9 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx47Q9CWX9 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Ddx47Q9CWX9 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx47Q9CWX9 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC16.79■□□□□ 0.28
Ddx47Q9CWX9 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx47Q9CWX9 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx47Q9CWX9 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.79■□□□□ 0.28
Ddx47Q9CWX9 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx47Q9CWX9 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx47Q9CWX9 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Ddx47Q9CWX9 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx47Q9CWX9 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.78■□□□□ 0.28
Ddx47Q9CWX9 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx47Q9CWX9 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx47Q9CWX9 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx47Q9CWX9 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx47Q9CWX9 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx47Q9CWX9 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx47Q9CWX9 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx47Q9CWX9 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx47Q9CWX9 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx47Q9CWX9 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx47Q9CWX9 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx47Q9CWX9 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx47Q9CWX9 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.78■□□□□ 0.28
Ddx47Q9CWX9 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx47Q9CWX9 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx47Q9CWX9 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx47Q9CWX9 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx47Q9CWX9 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx47Q9CWX9 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.78■□□□□ 0.28
Ddx47Q9CWX9 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ddx47Q9CWX9 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Ddx47Q9CWX9 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ddx47Q9CWX9 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.77■□□□□ 0.28
Ddx47Q9CWX9 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
Ddx47Q9CWX9 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ddx47Q9CWX9 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ddx47Q9CWX9 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Ddx47Q9CWX9 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ddx47Q9CWX9 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms