Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pfdn1Q9CWM4 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Pfdn1Q9CWM4 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pfdn1Q9CWM4 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC14.4□□□□□ -0.1
Pfdn1Q9CWM4 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pfdn1Q9CWM4 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pfdn1Q9CWM4 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC14.4□□□□□ -0.1
Pfdn1Q9CWM4 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pfdn1Q9CWM4 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pfdn1Q9CWM4 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC14.4□□□□□ -0.1
Pfdn1Q9CWM4 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC14.4□□□□□ -0.1
Pfdn1Q9CWM4 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Pfdn1Q9CWM4 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pfdn1Q9CWM4 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pfdn1Q9CWM4 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pfdn1Q9CWM4 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pfdn1Q9CWM4 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pfdn1Q9CWM4 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pfdn1Q9CWM4 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Pfdn1Q9CWM4 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pfdn1Q9CWM4 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pfdn1Q9CWM4 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pfdn1Q9CWM4 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pfdn1Q9CWM4 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pfdn1Q9CWM4 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pfdn1Q9CWM4 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pfdn1Q9CWM4 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pfdn1Q9CWM4 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pfdn1Q9CWM4 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.39□□□□□ -0.11
Pfdn1Q9CWM4 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.39□□□□□ -0.11
Pfdn1Q9CWM4 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC14.39□□□□□ -0.11
Pfdn1Q9CWM4 Golgb1-201ENSMUST00000023534 498 ntBASIC14.39□□□□□ -0.11
Pfdn1Q9CWM4 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pfdn1Q9CWM4 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pfdn1Q9CWM4 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pfdn1Q9CWM4 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Pfdn1Q9CWM4 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pfdn1Q9CWM4 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Pfdn1Q9CWM4 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Pfdn1Q9CWM4 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pfdn1Q9CWM4 Gm43272-201ENSMUST00000200599 1584 ntBASIC14.39□□□□□ -0.11
Pfdn1Q9CWM4 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pfdn1Q9CWM4 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pfdn1Q9CWM4 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pfdn1Q9CWM4 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pfdn1Q9CWM4 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pfdn1Q9CWM4 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pfdn1Q9CWM4 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pfdn1Q9CWM4 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pfdn1Q9CWM4 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pfdn1Q9CWM4 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Pfdn1Q9CWM4 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pfdn1Q9CWM4 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pfdn1Q9CWM4 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.38□□□□□ -0.11
Pfdn1Q9CWM4 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pfdn1Q9CWM4 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.38□□□□□ -0.11
Pfdn1Q9CWM4 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Pfdn1Q9CWM4 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pfdn1Q9CWM4 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.38□□□□□ -0.11
Pfdn1Q9CWM4 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.38□□□□□ -0.11
Pfdn1Q9CWM4 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pfdn1Q9CWM4 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pfdn1Q9CWM4 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Pfdn1Q9CWM4 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pfdn1Q9CWM4 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pfdn1Q9CWM4 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pfdn1Q9CWM4 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pfdn1Q9CWM4 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pfdn1Q9CWM4 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.38□□□□□ -0.11
Pfdn1Q9CWM4 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pfdn1Q9CWM4 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pfdn1Q9CWM4 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Pfdn1Q9CWM4 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pfdn1Q9CWM4 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pfdn1Q9CWM4 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pfdn1Q9CWM4 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pfdn1Q9CWM4 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pfdn1Q9CWM4 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pfdn1Q9CWM4 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.38□□□□□ -0.11
Pfdn1Q9CWM4 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Pfdn1Q9CWM4 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pfdn1Q9CWM4 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pfdn1Q9CWM4 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC14.37□□□□□ -0.11
Pfdn1Q9CWM4 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pfdn1Q9CWM4 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pfdn1Q9CWM4 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pfdn1Q9CWM4 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pfdn1Q9CWM4 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pfdn1Q9CWM4 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pfdn1Q9CWM4 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Pfdn1Q9CWM4 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Pfdn1Q9CWM4 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pfdn1Q9CWM4 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.37□□□□□ -0.11
Pfdn1Q9CWM4 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.37□□□□□ -0.11
Pfdn1Q9CWM4 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pfdn1Q9CWM4 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pfdn1Q9CWM4 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Pfdn1Q9CWM4 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC14.37□□□□□ -0.11
Pfdn1Q9CWM4 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Pfdn1Q9CWM4 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms