Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim33Q99PP7 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim33Q99PP7 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Trim33Q99PP7 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim33Q99PP7 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trim33Q99PP7 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trim33Q99PP7 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trim33Q99PP7 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trim33Q99PP7 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.16■□□□□ 0.18
Trim33Q99PP7 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.16■□□□□ 0.18
Trim33Q99PP7 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trim33Q99PP7 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim33Q99PP7 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trim33Q99PP7 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Trim33Q99PP7 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim33Q99PP7 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim33Q99PP7 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim33Q99PP7 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim33Q99PP7 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim33Q99PP7 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim33Q99PP7 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim33Q99PP7 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim33Q99PP7 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim33Q99PP7 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Trim33Q99PP7 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Trim33Q99PP7 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim33Q99PP7 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trim33Q99PP7 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim33Q99PP7 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim33Q99PP7 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim33Q99PP7 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim33Q99PP7 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim33Q99PP7 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trim33Q99PP7 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trim33Q99PP7 Gm18421-201ENSMUST00000204122 625 ntBASIC16.15■□□□□ 0.18
Trim33Q99PP7 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.15■□□□□ 0.18
Trim33Q99PP7 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim33Q99PP7 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim33Q99PP7 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim33Q99PP7 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim33Q99PP7 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim33Q99PP7 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim33Q99PP7 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim33Q99PP7 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Trim33Q99PP7 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Trim33Q99PP7 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim33Q99PP7 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim33Q99PP7 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim33Q99PP7 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim33Q99PP7 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim33Q99PP7 Gm9013-201ENSMUST00000132939 882 ntBASIC16.14■□□□□ 0.17
Trim33Q99PP7 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.14■□□□□ 0.17
Trim33Q99PP7 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim33Q99PP7 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim33Q99PP7 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trim33Q99PP7 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.14■□□□□ 0.17
Trim33Q99PP7 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim33Q99PP7 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.14■□□□□ 0.17
Trim33Q99PP7 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim33Q99PP7 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Trim33Q99PP7 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim33Q99PP7 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim33Q99PP7 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim33Q99PP7 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Trim33Q99PP7 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim33Q99PP7 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim33Q99PP7 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim33Q99PP7 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim33Q99PP7 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim33Q99PP7 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim33Q99PP7 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim33Q99PP7 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim33Q99PP7 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim33Q99PP7 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim33Q99PP7 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim33Q99PP7 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.13■□□□□ 0.17
Trim33Q99PP7 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.13■□□□□ 0.17
Trim33Q99PP7 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim33Q99PP7 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim33Q99PP7 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim33Q99PP7 AA414768-201ENSMUST00000121924 1257 ntBASIC16.13■□□□□ 0.17
Trim33Q99PP7 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim33Q99PP7 Gm7977-201ENSMUST00000193787 748 ntBASIC16.13■□□□□ 0.17
Trim33Q99PP7 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Trim33Q99PP7 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.13■□□□□ 0.17
Trim33Q99PP7 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim33Q99PP7 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim33Q99PP7 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.13■□□□□ 0.17
Trim33Q99PP7 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim33Q99PP7 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim33Q99PP7 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
Trim33Q99PP7 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim33Q99PP7 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim33Q99PP7 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim33Q99PP7 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Trim33Q99PP7 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim33Q99PP7 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim33Q99PP7 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim33Q99PP7 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Trim33Q99PP7 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms