Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Raf1Q99N57 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Raf1Q99N57 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Raf1Q99N57 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
Raf1Q99N57 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Raf1Q99N57 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Raf1Q99N57 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Raf1Q99N57 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Raf1Q99N57 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Raf1Q99N57 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.65□□□□□ -0.06
Raf1Q99N57 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Raf1Q99N57 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Raf1Q99N57 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Raf1Q99N57 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.65□□□□□ -0.06
Raf1Q99N57 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Raf1Q99N57 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Raf1Q99N57 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Raf1Q99N57 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Raf1Q99N57 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Raf1Q99N57 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Raf1Q99N57 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.64□□□□□ -0.07
Raf1Q99N57 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Raf1Q99N57 Gm10517-202ENSMUST00000192970 758 ntBASIC14.64□□□□□ -0.07
Raf1Q99N57 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC14.64□□□□□ -0.07
Raf1Q99N57 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Raf1Q99N57 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Raf1Q99N57 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Raf1Q99N57 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Raf1Q99N57 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Raf1Q99N57 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Raf1Q99N57 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Raf1Q99N57 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Raf1Q99N57 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.64□□□□□ -0.07
Raf1Q99N57 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Raf1Q99N57 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Raf1Q99N57 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Raf1Q99N57 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.63□□□□□ -0.07
Raf1Q99N57 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Raf1Q99N57 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Raf1Q99N57 Gm7712-202ENSMUST00000222331 1510 ntBASIC14.63□□□□□ -0.07
Raf1Q99N57 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Raf1Q99N57 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Raf1Q99N57 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Raf1Q99N57 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC14.63□□□□□ -0.07
Raf1Q99N57 Gm3375-201ENSMUST00000203929 796 ntBASIC14.63□□□□□ -0.07
Raf1Q99N57 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Raf1Q99N57 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Raf1Q99N57 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Raf1Q99N57 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Raf1Q99N57 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Raf1Q99N57 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Raf1Q99N57 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
Raf1Q99N57 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.63□□□□□ -0.07
Raf1Q99N57 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Raf1Q99N57 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Raf1Q99N57 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Raf1Q99N57 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Raf1Q99N57 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.62□□□□□ -0.07
Raf1Q99N57 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Raf1Q99N57 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Raf1Q99N57 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Raf1Q99N57 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Raf1Q99N57 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Raf1Q99N57 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Raf1Q99N57 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Raf1Q99N57 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Raf1Q99N57 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Raf1Q99N57 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Raf1Q99N57 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Raf1Q99N57 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC14.62□□□□□ -0.07
Raf1Q99N57 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
Raf1Q99N57 Gm37292-201ENSMUST00000192062 758 ntBASIC14.62□□□□□ -0.07
Raf1Q99N57 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Raf1Q99N57 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Raf1Q99N57 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC14.62□□□□□ -0.07
Raf1Q99N57 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Raf1Q99N57 Otx2os1-204ENSMUST00000227221 751 ntBASIC14.62□□□□□ -0.07
Raf1Q99N57 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Raf1Q99N57 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.62□□□□□ -0.07
Raf1Q99N57 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Raf1Q99N57 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Raf1Q99N57 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.62□□□□□ -0.07
Raf1Q99N57 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Raf1Q99N57 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Raf1Q99N57 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Raf1Q99N57 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.62□□□□□ -0.07
Raf1Q99N57 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.62□□□□□ -0.07
Raf1Q99N57 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Raf1Q99N57 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Raf1Q99N57 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Raf1Q99N57 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
Raf1Q99N57 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Raf1Q99N57 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Raf1Q99N57 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Raf1Q99N57 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Raf1Q99N57 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Raf1Q99N57 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Raf1Q99N57 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Raf1Q99N57 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Raf1Q99N57 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms