Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Col25a1Q99MQ5 Gm7229-201ENSMUST00000214719 1007 ntBASIC16.84■□□□□ 0.29
Col25a1Q99MQ5 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col25a1Q99MQ5 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Col25a1Q99MQ5 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.84■□□□□ 0.29
Col25a1Q99MQ5 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col25a1Q99MQ5 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col25a1Q99MQ5 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col25a1Q99MQ5 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col25a1Q99MQ5 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col25a1Q99MQ5 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col25a1Q99MQ5 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.84■□□□□ 0.29
Col25a1Q99MQ5 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col25a1Q99MQ5 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col25a1Q99MQ5 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Col25a1Q99MQ5 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col25a1Q99MQ5 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Col25a1Q99MQ5 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col25a1Q99MQ5 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC16.83■□□□□ 0.28
Col25a1Q99MQ5 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Col25a1Q99MQ5 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col25a1Q99MQ5 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col25a1Q99MQ5 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Col25a1Q99MQ5 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Col25a1Q99MQ5 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col25a1Q99MQ5 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Col25a1Q99MQ5 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col25a1Q99MQ5 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col25a1Q99MQ5 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Col25a1Q99MQ5 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col25a1Q99MQ5 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col25a1Q99MQ5 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Col25a1Q99MQ5 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col25a1Q99MQ5 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Col25a1Q99MQ5 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col25a1Q99MQ5 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col25a1Q99MQ5 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Col25a1Q99MQ5 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
Col25a1Q99MQ5 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Col25a1Q99MQ5 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Col25a1Q99MQ5 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Col25a1Q99MQ5 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC16.82■□□□□ 0.28
Col25a1Q99MQ5 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Col25a1Q99MQ5 Gm7506-201ENSMUST00000207758 815 ntBASIC16.82■□□□□ 0.28
Col25a1Q99MQ5 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Col25a1Q99MQ5 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.82■□□□□ 0.28
Col25a1Q99MQ5 Cdk7-205ENSMUST00000225990 1159 ntBASIC16.82■□□□□ 0.28
Col25a1Q99MQ5 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.82■□□□□ 0.28
Col25a1Q99MQ5 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Col25a1Q99MQ5 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Col25a1Q99MQ5 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col25a1Q99MQ5 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col25a1Q99MQ5 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col25a1Q99MQ5 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col25a1Q99MQ5 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col25a1Q99MQ5 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col25a1Q99MQ5 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col25a1Q99MQ5 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.81■□□□□ 0.28
Col25a1Q99MQ5 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col25a1Q99MQ5 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col25a1Q99MQ5 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Col25a1Q99MQ5 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col25a1Q99MQ5 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Col25a1Q99MQ5 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Col25a1Q99MQ5 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Col25a1Q99MQ5 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Col25a1Q99MQ5 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col25a1Q99MQ5 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col25a1Q99MQ5 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Col25a1Q99MQ5 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col25a1Q99MQ5 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col25a1Q99MQ5 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC16.81■□□□□ 0.28
Col25a1Q99MQ5 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col25a1Q99MQ5 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.81■□□□□ 0.28
Col25a1Q99MQ5 Gm11764-201ENSMUST00000120221 623 ntBASIC16.81■□□□□ 0.28
Col25a1Q99MQ5 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col25a1Q99MQ5 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC16.81■□□□□ 0.28
Col25a1Q99MQ5 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC16.81■□□□□ 0.28
Col25a1Q99MQ5 AC125206.2-201ENSMUST00000217454 574 ntBASIC16.81■□□□□ 0.28
Col25a1Q99MQ5 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col25a1Q99MQ5 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col25a1Q99MQ5 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col25a1Q99MQ5 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col25a1Q99MQ5 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col25a1Q99MQ5 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Col25a1Q99MQ5 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.81■□□□□ 0.28
Col25a1Q99MQ5 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Col25a1Q99MQ5 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col25a1Q99MQ5 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col25a1Q99MQ5 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.8■□□□□ 0.28
Col25a1Q99MQ5 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col25a1Q99MQ5 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col25a1Q99MQ5 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Col25a1Q99MQ5 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col25a1Q99MQ5 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col25a1Q99MQ5 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col25a1Q99MQ5 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
Col25a1Q99MQ5 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Col25a1Q99MQ5 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC16.8■□□□□ 0.28
Col25a1Q99MQ5 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms