Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Col20a1Q923P0 Gm45244-201ENSMUST00000211328 2200 ntBASIC19.18■□□□□ 0.66
Col20a1Q923P0 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Col20a1Q923P0 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col20a1Q923P0 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col20a1Q923P0 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Col20a1Q923P0 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col20a1Q923P0 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col20a1Q923P0 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Col20a1Q923P0 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col20a1Q923P0 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col20a1Q923P0 Gm4459-201ENSMUST00000118750 468 ntBASIC19.18■□□□□ 0.66
Col20a1Q923P0 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC19.18■□□□□ 0.66
Col20a1Q923P0 Gm4535-201ENSMUST00000182274 558 ntBASIC19.18■□□□□ 0.66
Col20a1Q923P0 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Col20a1Q923P0 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col20a1Q923P0 Gm10355-201ENSMUST00000097146 517 ntBASIC19.18■□□□□ 0.66
Col20a1Q923P0 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Col20a1Q923P0 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Col20a1Q923P0 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
Col20a1Q923P0 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col20a1Q923P0 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Col20a1Q923P0 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Col20a1Q923P0 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col20a1Q923P0 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col20a1Q923P0 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col20a1Q923P0 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col20a1Q923P0 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col20a1Q923P0 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Col20a1Q923P0 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col20a1Q923P0 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col20a1Q923P0 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Col20a1Q923P0 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col20a1Q923P0 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col20a1Q923P0 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col20a1Q923P0 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Col20a1Q923P0 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Col20a1Q923P0 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC19.17■□□□□ 0.66
Col20a1Q923P0 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
Col20a1Q923P0 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC19.17■□□□□ 0.66
Col20a1Q923P0 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col20a1Q923P0 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Col20a1Q923P0 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col20a1Q923P0 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col20a1Q923P0 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col20a1Q923P0 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col20a1Q923P0 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Col20a1Q923P0 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col20a1Q923P0 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col20a1Q923P0 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col20a1Q923P0 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Col20a1Q923P0 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Col20a1Q923P0 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col20a1Q923P0 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col20a1Q923P0 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col20a1Q923P0 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col20a1Q923P0 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Col20a1Q923P0 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Col20a1Q923P0 Gm2651-201ENSMUST00000203560 838 ntBASIC19.16■□□□□ 0.66
Col20a1Q923P0 Gm6443-201ENSMUST00000203599 874 ntBASIC19.16■□□□□ 0.66
Col20a1Q923P0 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col20a1Q923P0 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col20a1Q923P0 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col20a1Q923P0 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Col20a1Q923P0 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col20a1Q923P0 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col20a1Q923P0 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col20a1Q923P0 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col20a1Q923P0 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col20a1Q923P0 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col20a1Q923P0 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC19.15■□□□□ 0.66
Col20a1Q923P0 Gm10060-201ENSMUST00000212002 111 ntBASIC19.15■□□□□ 0.66
Col20a1Q923P0 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Col20a1Q923P0 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col20a1Q923P0 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col20a1Q923P0 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col20a1Q923P0 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col20a1Q923P0 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col20a1Q923P0 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col20a1Q923P0 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col20a1Q923P0 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC19.14■□□□□ 0.66
Col20a1Q923P0 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Col20a1Q923P0 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Col20a1Q923P0 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Col20a1Q923P0 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col20a1Q923P0 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col20a1Q923P0 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col20a1Q923P0 Gm25990-201ENSMUST00000102440 86 ntBASIC19.14■□□□□ 0.65
Col20a1Q923P0 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col20a1Q923P0 Gm13216-201ENSMUST00000117145 591 ntBASIC19.14■□□□□ 0.65
Col20a1Q923P0 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC19.14■□□□□ 0.65
Col20a1Q923P0 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC19.14■□□□□ 0.65
Col20a1Q923P0 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
Col20a1Q923P0 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
Col20a1Q923P0 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC19.14■□□□□ 0.65
Col20a1Q923P0 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.14■□□□□ 0.65
Col20a1Q923P0 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col20a1Q923P0 Gm43514-201ENSMUST00000198852 424 ntBASIC19.14■□□□□ 0.65
Col20a1Q923P0 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col20a1Q923P0 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms