Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb6Q91XZ4 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb6Q91XZ4 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
Pcdhb6Q91XZ4 Gm6659-201ENSMUST00000174752 547 ntBASIC16.75■□□□□ 0.27
Pcdhb6Q91XZ4 Gm6345-202ENSMUST00000180900 204 ntBASIC16.75■□□□□ 0.27
Pcdhb6Q91XZ4 Gm44430-201ENSMUST00000203376 995 ntBASIC16.75■□□□□ 0.27
Pcdhb6Q91XZ4 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.75■□□□□ 0.27
Pcdhb6Q91XZ4 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb6Q91XZ4 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb6Q91XZ4 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb6Q91XZ4 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb6Q91XZ4 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb6Q91XZ4 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb6Q91XZ4 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb6Q91XZ4 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb6Q91XZ4 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.75■□□□□ 0.27
Pcdhb6Q91XZ4 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb6Q91XZ4 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb6Q91XZ4 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Pcdhb6Q91XZ4 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.75■□□□□ 0.27
Pcdhb6Q91XZ4 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb6Q91XZ4 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb6Q91XZ4 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.75■□□□□ 0.27
Pcdhb6Q91XZ4 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb6Q91XZ4 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb6Q91XZ4 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb6Q91XZ4 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb6Q91XZ4 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb6Q91XZ4 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb6Q91XZ4 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb6Q91XZ4 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb6Q91XZ4 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb6Q91XZ4 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb6Q91XZ4 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Pcdhb6Q91XZ4 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.74■□□□□ 0.27
Pcdhb6Q91XZ4 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb6Q91XZ4 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb6Q91XZ4 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Pcdhb6Q91XZ4 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb6Q91XZ4 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.74■□□□□ 0.27
Pcdhb6Q91XZ4 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb6Q91XZ4 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb6Q91XZ4 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb6Q91XZ4 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.73■□□□□ 0.27
Pcdhb6Q91XZ4 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb6Q91XZ4 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb6Q91XZ4 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb6Q91XZ4 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Pcdhb6Q91XZ4 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb6Q91XZ4 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb6Q91XZ4 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb6Q91XZ4 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb6Q91XZ4 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb6Q91XZ4 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb6Q91XZ4 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb6Q91XZ4 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb6Q91XZ4 Gm13836-201ENSMUST00000121159 501 ntBASIC16.73■□□□□ 0.27
Pcdhb6Q91XZ4 Gm10052-201ENSMUST00000168019 960 ntBASIC16.73■□□□□ 0.27
Pcdhb6Q91XZ4 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb6Q91XZ4 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb6Q91XZ4 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb6Q91XZ4 Gm7729-201ENSMUST00000050143 801 ntBASIC16.73■□□□□ 0.27
Pcdhb6Q91XZ4 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb6Q91XZ4 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb6Q91XZ4 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb6Q91XZ4 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb6Q91XZ4 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb6Q91XZ4 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb6Q91XZ4 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb6Q91XZ4 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb6Q91XZ4 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb6Q91XZ4 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb6Q91XZ4 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb6Q91XZ4 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb6Q91XZ4 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb6Q91XZ4 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb6Q91XZ4 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb6Q91XZ4 Gm6623-201ENSMUST00000173570 544 ntBASIC16.72■□□□□ 0.27
Pcdhb6Q91XZ4 Gm23634-201ENSMUST00000175071 91 ntBASIC16.72■□□□□ 0.27
Pcdhb6Q91XZ4 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
Pcdhb6Q91XZ4 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb6Q91XZ4 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb6Q91XZ4 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb6Q91XZ4 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Pcdhb6Q91XZ4 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb6Q91XZ4 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb6Q91XZ4 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb6Q91XZ4 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.72■□□□□ 0.27
Pcdhb6Q91XZ4 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb6Q91XZ4 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb6Q91XZ4 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb6Q91XZ4 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb6Q91XZ4 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb6Q91XZ4 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.71■□□□□ 0.27
Pcdhb6Q91XZ4 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb6Q91XZ4 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb6Q91XZ4 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb6Q91XZ4 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb6Q91XZ4 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb6Q91XZ4 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms