Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhgb4Q91XX6 Gm6754-201ENSMUST00000117124 913 ntBASIC17.27■□□□□ 0.36
Pcdhgb4Q91XX6 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhgb4Q91XX6 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhgb4Q91XX6 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhgb4Q91XX6 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.27■□□□□ 0.36
Pcdhgb4Q91XX6 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.27■□□□□ 0.36
Pcdhgb4Q91XX6 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Pcdhgb4Q91XX6 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhgb4Q91XX6 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhgb4Q91XX6 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhgb4Q91XX6 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.27■□□□□ 0.36
Pcdhgb4Q91XX6 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.27■□□□□ 0.36
Pcdhgb4Q91XX6 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdhgb4Q91XX6 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdhgb4Q91XX6 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Pcdhgb4Q91XX6 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdhgb4Q91XX6 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdhgb4Q91XX6 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdhgb4Q91XX6 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Pcdhgb4Q91XX6 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhgb4Q91XX6 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Pcdhgb4Q91XX6 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.26■□□□□ 0.35
Pcdhgb4Q91XX6 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhgb4Q91XX6 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhgb4Q91XX6 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhgb4Q91XX6 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhgb4Q91XX6 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhgb4Q91XX6 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhgb4Q91XX6 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhgb4Q91XX6 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhgb4Q91XX6 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhgb4Q91XX6 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhgb4Q91XX6 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.26■□□□□ 0.35
Pcdhgb4Q91XX6 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.26■□□□□ 0.35
Pcdhgb4Q91XX6 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.26■□□□□ 0.35
Pcdhgb4Q91XX6 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhgb4Q91XX6 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Pcdhgb4Q91XX6 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhgb4Q91XX6 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhgb4Q91XX6 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhgb4Q91XX6 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhgb4Q91XX6 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhgb4Q91XX6 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhgb4Q91XX6 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Pcdhgb4Q91XX6 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhgb4Q91XX6 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Pcdhgb4Q91XX6 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhgb4Q91XX6 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhgb4Q91XX6 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhgb4Q91XX6 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.25■□□□□ 0.35
Pcdhgb4Q91XX6 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhgb4Q91XX6 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Pcdhgb4Q91XX6 Gm6433-201ENSMUST00000118634 875 ntBASIC17.25■□□□□ 0.35
Pcdhgb4Q91XX6 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.25■□□□□ 0.35
Pcdhgb4Q91XX6 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.25■□□□□ 0.35
Pcdhgb4Q91XX6 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.25■□□□□ 0.35
Pcdhgb4Q91XX6 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC17.25■□□□□ 0.35
Pcdhgb4Q91XX6 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.25■□□□□ 0.35
Pcdhgb4Q91XX6 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhgb4Q91XX6 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhgb4Q91XX6 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhgb4Q91XX6 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhgb4Q91XX6 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhgb4Q91XX6 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Pcdhgb4Q91XX6 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.25■□□□□ 0.35
Pcdhgb4Q91XX6 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhgb4Q91XX6 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhgb4Q91XX6 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhgb4Q91XX6 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhgb4Q91XX6 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhgb4Q91XX6 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhgb4Q91XX6 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhgb4Q91XX6 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhgb4Q91XX6 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhgb4Q91XX6 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhgb4Q91XX6 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhgb4Q91XX6 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhgb4Q91XX6 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhgb4Q91XX6 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhgb4Q91XX6 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhgb4Q91XX6 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhgb4Q91XX6 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Pcdhgb4Q91XX6 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC17.24■□□□□ 0.35
Pcdhgb4Q91XX6 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.24■□□□□ 0.35
Pcdhgb4Q91XX6 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.24■□□□□ 0.35
Pcdhgb4Q91XX6 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.24■□□□□ 0.35
Pcdhgb4Q91XX6 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhgb4Q91XX6 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhgb4Q91XX6 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhgb4Q91XX6 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Pcdhgb4Q91XX6 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
Pcdhgb4Q91XX6 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgb4Q91XX6 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgb4Q91XX6 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Pcdhgb4Q91XX6 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.23■□□□□ 0.35
Pcdhgb4Q91XX6 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgb4Q91XX6 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgb4Q91XX6 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgb4Q91XX6 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms