Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Dio3-201ENSMUST00000097228 1449 ntBASIC15.43■□□□□ 0.06
Pcdhgc3Q91XX1 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhgc3Q91XX1 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhgc3Q91XX1 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhgc3Q91XX1 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC15.43■□□□□ 0.06
Pcdhgc3Q91XX1 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhgc3Q91XX1 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC15.43■□□□□ 0.06
Pcdhgc3Q91XX1 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhgc3Q91XX1 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhgc3Q91XX1 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhgc3Q91XX1 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhgc3Q91XX1 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhgc3Q91XX1 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhgc3Q91XX1 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhgc3Q91XX1 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhgc3Q91XX1 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhgc3Q91XX1 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Pcdhgc3Q91XX1 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhgc3Q91XX1 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhgc3Q91XX1 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhgc3Q91XX1 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhgc3Q91XX1 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Pcdhgc3Q91XX1 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhgc3Q91XX1 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhgc3Q91XX1 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.42■□□□□ 0.06
Pcdhgc3Q91XX1 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhgc3Q91XX1 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Pcdhgc3Q91XX1 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.42■□□□□ 0.06
Pcdhgc3Q91XX1 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhgc3Q91XX1 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Pcdhgc3Q91XX1 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC15.42■□□□□ 0.06
Pcdhgc3Q91XX1 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhgc3Q91XX1 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhgc3Q91XX1 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhgc3Q91XX1 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhgc3Q91XX1 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
Pcdhgc3Q91XX1 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.42■□□□□ 0.06
Pcdhgc3Q91XX1 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhgc3Q91XX1 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhgc3Q91XX1 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhgc3Q91XX1 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhgc3Q91XX1 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhgc3Q91XX1 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhgc3Q91XX1 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.42■□□□□ 0.06
Pcdhgc3Q91XX1 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhgc3Q91XX1 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhgc3Q91XX1 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhgc3Q91XX1 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhgc3Q91XX1 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhgc3Q91XX1 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.41■□□□□ 0.06
Pcdhgc3Q91XX1 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhgc3Q91XX1 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Pcdhgc3Q91XX1 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Pcdhgc3Q91XX1 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhgc3Q91XX1 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhgc3Q91XX1 AC166341.7-201ENSMUST00000221698 126 ntBASIC15.41■□□□□ 0.06
Pcdhgc3Q91XX1 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhgc3Q91XX1 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhgc3Q91XX1 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhgc3Q91XX1 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhgc3Q91XX1 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhgc3Q91XX1 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhgc3Q91XX1 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC15.41■□□□□ 0.06
Pcdhgc3Q91XX1 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhgc3Q91XX1 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.41■□□□□ 0.06
Pcdhgc3Q91XX1 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhgc3Q91XX1 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhgc3Q91XX1 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
Pcdhgc3Q91XX1 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Pcdhgc3Q91XX1 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhgc3Q91XX1 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhgc3Q91XX1 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Pcdhgc3Q91XX1 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhgc3Q91XX1 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhgc3Q91XX1 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhgc3Q91XX1 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhgc3Q91XX1 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhgc3Q91XX1 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhgc3Q91XX1 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhgc3Q91XX1 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
Pcdhgc3Q91XX1 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhgc3Q91XX1 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC15.4■□□□□ 0.06
Pcdhgc3Q91XX1 Gm17661-201ENSMUST00000170317 270 ntBASIC15.4■□□□□ 0.06
Pcdhgc3Q91XX1 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC15.4■□□□□ 0.06
Pcdhgc3Q91XX1 Gm27000-201ENSMUST00000182943 842 ntBASIC15.4■□□□□ 0.06
Pcdhgc3Q91XX1 Gm29257-201ENSMUST00000186115 639 ntBASIC15.4■□□□□ 0.06
Pcdhgc3Q91XX1 Gm20049-201ENSMUST00000219950 730 ntBASIC15.4■□□□□ 0.06
Pcdhgc3Q91XX1 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhgc3Q91XX1 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhgc3Q91XX1 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Pcdhgc3Q91XX1 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhgc3Q91XX1 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhgc3Q91XX1 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhgc3Q91XX1 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhgc3Q91XX1 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhgc3Q91XX1 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhgc3Q91XX1 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhgc3Q91XX1 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhgc3Q91XX1 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhgc3Q91XX1 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms