Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ddx41Q91VN6 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC18.67■□□□□ 0.58
Ddx41Q91VN6 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ddx41Q91VN6 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ddx41Q91VN6 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ddx41Q91VN6 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.67■□□□□ 0.58
Ddx41Q91VN6 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ddx41Q91VN6 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ddx41Q91VN6 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ddx41Q91VN6 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ddx41Q91VN6 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ddx41Q91VN6 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ddx41Q91VN6 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC18.67■□□□□ 0.58
Ddx41Q91VN6 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ddx41Q91VN6 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ddx41Q91VN6 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Ddx41Q91VN6 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ddx41Q91VN6 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx41Q91VN6 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC18.66■□□□□ 0.58
Ddx41Q91VN6 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx41Q91VN6 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Ddx41Q91VN6 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx41Q91VN6 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Ddx41Q91VN6 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx41Q91VN6 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx41Q91VN6 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.66■□□□□ 0.58
Ddx41Q91VN6 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx41Q91VN6 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC18.66■□□□□ 0.58
Ddx41Q91VN6 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx41Q91VN6 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC18.66■□□□□ 0.58
Ddx41Q91VN6 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Ddx41Q91VN6 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx41Q91VN6 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx41Q91VN6 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx41Q91VN6 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx41Q91VN6 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx41Q91VN6 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx41Q91VN6 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx41Q91VN6 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx41Q91VN6 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
Ddx41Q91VN6 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx41Q91VN6 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ddx41Q91VN6 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC18.65■□□□□ 0.58
Ddx41Q91VN6 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ddx41Q91VN6 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ddx41Q91VN6 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ddx41Q91VN6 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Ddx41Q91VN6 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ddx41Q91VN6 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ddx41Q91VN6 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ddx41Q91VN6 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ddx41Q91VN6 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Ddx41Q91VN6 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ddx41Q91VN6 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ddx41Q91VN6 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ddx41Q91VN6 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ddx41Q91VN6 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC18.64■□□□□ 0.58
Ddx41Q91VN6 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ddx41Q91VN6 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ddx41Q91VN6 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
Ddx41Q91VN6 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Ddx41Q91VN6 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ddx41Q91VN6 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ddx41Q91VN6 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ddx41Q91VN6 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ddx41Q91VN6 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ddx41Q91VN6 Spr-ps1-201ENSMUST00000089584 605 ntBASIC18.64■□□□□ 0.57
Ddx41Q91VN6 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ddx41Q91VN6 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ddx41Q91VN6 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ddx41Q91VN6 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ddx41Q91VN6 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ddx41Q91VN6 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ddx41Q91VN6 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ddx41Q91VN6 Gm43598-201ENSMUST00000202482 2479 ntBASIC18.63■□□□□ 0.57
Ddx41Q91VN6 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ddx41Q91VN6 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ddx41Q91VN6 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ddx41Q91VN6 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
Ddx41Q91VN6 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC18.63■□□□□ 0.57
Ddx41Q91VN6 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ddx41Q91VN6 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC18.63■□□□□ 0.57
Ddx41Q91VN6 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC18.63■□□□□ 0.57
Ddx41Q91VN6 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
Ddx41Q91VN6 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ddx41Q91VN6 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Ddx41Q91VN6 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ddx41Q91VN6 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ddx41Q91VN6 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC18.63■□□□□ 0.57
Ddx41Q91VN6 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ddx41Q91VN6 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ddx41Q91VN6 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ddx41Q91VN6 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ddx41Q91VN6 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ddx41Q91VN6 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ddx41Q91VN6 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Ddx41Q91VN6 Gm29707-201ENSMUST00000196325 491 ntBASIC18.62■□□□□ 0.57
Ddx41Q91VN6 Gm18421-201ENSMUST00000204122 625 ntBASIC18.62■□□□□ 0.57
Ddx41Q91VN6 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
Ddx41Q91VN6 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms