Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps39Q8R5L3 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps39Q8R5L3 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.33■□□□□ 0.2
Vps39Q8R5L3 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps39Q8R5L3 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Vps39Q8R5L3 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Vps39Q8R5L3 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps39Q8R5L3 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps39Q8R5L3 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps39Q8R5L3 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps39Q8R5L3 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps39Q8R5L3 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps39Q8R5L3 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps39Q8R5L3 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps39Q8R5L3 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps39Q8R5L3 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps39Q8R5L3 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps39Q8R5L3 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps39Q8R5L3 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps39Q8R5L3 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps39Q8R5L3 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vps39Q8R5L3 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.32■□□□□ 0.2
Vps39Q8R5L3 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps39Q8R5L3 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps39Q8R5L3 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps39Q8R5L3 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps39Q8R5L3 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps39Q8R5L3 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps39Q8R5L3 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps39Q8R5L3 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps39Q8R5L3 Gm11336-201ENSMUST00000118168 334 ntBASIC16.32■□□□□ 0.2
Vps39Q8R5L3 Gm13559-201ENSMUST00000120476 863 ntBASIC16.32■□□□□ 0.2
Vps39Q8R5L3 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vps39Q8R5L3 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps39Q8R5L3 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps39Q8R5L3 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vps39Q8R5L3 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps39Q8R5L3 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps39Q8R5L3 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps39Q8R5L3 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps39Q8R5L3 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps39Q8R5L3 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps39Q8R5L3 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vps39Q8R5L3 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps39Q8R5L3 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps39Q8R5L3 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.32■□□□□ 0.2
Vps39Q8R5L3 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps39Q8R5L3 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps39Q8R5L3 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps39Q8R5L3 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps39Q8R5L3 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Vps39Q8R5L3 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Vps39Q8R5L3 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Vps39Q8R5L3 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Vps39Q8R5L3 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps39Q8R5L3 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps39Q8R5L3 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps39Q8R5L3 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Vps39Q8R5L3 Mir1668-201ENSMUST00000184114 107 ntBASIC16.31■□□□□ 0.2
Vps39Q8R5L3 Gm18421-201ENSMUST00000204122 625 ntBASIC16.31■□□□□ 0.2
Vps39Q8R5L3 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps39Q8R5L3 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Vps39Q8R5L3 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps39Q8R5L3 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps39Q8R5L3 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps39Q8R5L3 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Vps39Q8R5L3 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Vps39Q8R5L3 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Vps39Q8R5L3 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Vps39Q8R5L3 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Vps39Q8R5L3 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps39Q8R5L3 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps39Q8R5L3 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.31■□□□□ 0.2
Vps39Q8R5L3 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Vps39Q8R5L3 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps39Q8R5L3 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps39Q8R5L3 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Vps39Q8R5L3 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps39Q8R5L3 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Vps39Q8R5L3 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Vps39Q8R5L3 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Vps39Q8R5L3 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps39Q8R5L3 Mir5130-201ENSMUST00000175160 84 ntBASIC16.3■□□□□ 0.2
Vps39Q8R5L3 Gm29707-201ENSMUST00000196325 491 ntBASIC16.3■□□□□ 0.2
Vps39Q8R5L3 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps39Q8R5L3 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps39Q8R5L3 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps39Q8R5L3 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps39Q8R5L3 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps39Q8R5L3 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps39Q8R5L3 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps39Q8R5L3 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.3■□□□□ 0.2
Vps39Q8R5L3 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps39Q8R5L3 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
Vps39Q8R5L3 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps39Q8R5L3 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Vps39Q8R5L3 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Vps39Q8R5L3 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps39Q8R5L3 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps39Q8R5L3 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms